Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1299 ATGCAGGTACAAGCGTATGTAGAGAGAAAAGCATTGGCTCATTCATTGAACGATACTAAAACAGCGGTTCGACAGCTACACAAACTTGCGAGTGCAATAATAACAGTGATAATAACGGTGCTGTCTCTCTTGGTGATGGGTTTGGCCACAACTAAAGTCATCTTCGTTGTCACTTCTCAACTGTTGCTCGTAGGTTTTGTGTTCCAAAATATGTGCAAAACTGTGTTTGAATCAATTATCTTTGTCTTCATCATGCACCCTTTTGATGTCGGAGATCGCTGTGTCATTAGTGGAACTCAGATGATTGTAGAAGAGATGAATATATTGACAACAGTTTTCTTGAGATATGACGGCGAGAAAATATATTATCCGAACTCAGTTCTTCTCACGATTCCTATAAGCAATTTCAGAAGAAGCCCAGATATGGCTGAAGCTGTGGAATTCATTATTGACGCCTCTACTCCTATGGACAGCATCACTGCCCTCAAGAAGGCCATTCAAGCGTACATTGAGAGCAAACCCAAGTACTGGAATCCAAAACATGTGGTGTTAGTGAGAGAGATAGAAAACATGGACAAGTTGAGGATGGCTCTCTGTGTTCAACACACCATGAACCATCAAAACTTCGGCGAGAAGTGCTGCCGGATATCGGAACTTCTGCTAGAGCTCAAGAAGATCTTTGAGAGCCTTGGCATTAAGTATCGTCTTCTTCCTCAAGAAGTACACCTCACACAGGTCAACTTTGGCAACAACAATGGAGCCTTCCCACTCTTATCTTCATAA 783 0.4215 MQVQAYVERKALAHSLNDTKTAVRQLHKLASAIITVIITVLSLLVMGLATTKVIFVVTSQLLLVGFVFQNMCKTVFESIIFVFIMHPFDVGDRCVISGTQMIVEEMNILTTVFLRYDGEKIYYPNSVLLTIPISNFRRSPDMAEAVEFIIDASTPMDSITALKKAIQAYIESKPKYWNPKHVVLVREIENMDKLRMALCVQHTMNHQNFGEKCCRISELLLELKKIFESLGIKYRLLPQEVHLTQVNFGNNNGAFPLLSS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1299 260 Gene3D - 87 136 IPR023408 -
Mibi04g1299 260 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 3 246 IPR016688 -
Mibi04g1299 260 SUPERFAMILY Sm-like ribonucleoproteins 77 136 IPR010920 -
Mibi04g1299 260 Pfam Mechanosensitive ion channel 28 233 IPR006685 GO:0016020|GO:0055085
Mibi04g1299 260 FunFam Predicted mechanosensitive ion channel 87 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1299 Mibi-ChrMibi04 32867998 32870465 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1299 3 247 Mechanosensitive Ion Channel Family AT5G12080 54.286 4.71e-92 285