Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1297 ATGGAGCTCAACAAACTCGAAATCCCCAAAACTAACAGTGACCAAGTCCTCATCAACGTGGAACATCTCCATCATCAGCAACAAAGCCCAAGCCCTAAACAAGAATATTCTTCTCAACAACCCTATCATCATCATCATCCAAGAAACATAACACTTCAACGCCTCAATTTCTCCAAACCAAGATCACGTTTTGAAGAAATCAACTACCCAATCTCAACACCCAAACCAACTTACAACAATCCCATCCCAGAATCCGATGATCATCCACCTGAAAATCCCACTAATAATGATAACAACTCCTCCGATGACGACGACGACGACGACGACGAATGGTTCGAAAACTTAGACGAATATGGCAAGGAAGACGAAGAAACCACCGCAAAGAGTAGAAAAAAGAGGAAGCTAAAGATCAACAAGAGGGCTTTACTAGAATGGACGTTGTTCCTCACCATCATGACTTGCCTGATATGTTCTCTCACTATCAAATCCCTCAAGAACCAGACTCAATGGAGCTTAGAAATCTGGAAATGGTGCTTATTGGTGATGGTTATCTTCTGTGGACGCCTTGTCTCTGCATGGGTAGTCCGAATCCTAGTTTTCCTCATTGAAAGAAACTTCATGTTAAGAGAGAAAGTACTCTACTTCGTGTTCGGTCTTAGAAAAAGCTTCCGAAACTGTGTCTGGCTAGCCCTAGTTTTAACGGCATGGATGATTATGTTCCATGACGCTCATAAAAAGCACGAAGTCCTCAAAAAATTCTTCCGGTTCCTCGTAGCCATACTAATTGGTGCAACCATTTGGCTGTTGAAAATAGTCCTAGTTAAGGTTTTAGCTTCTTCATTTCACGTGGCGGCTTTTTTTGATAGGATGAAAGAGAGTGTTTTTCATCACTATGTGTTGGATGCCTTATCGGGGCCACCGTTGGATGAGGAGGAGATGGACTTGCCTACGAGGCATTTACAGGCGTCTAGGTCGATGCCAGCGAGGTTGAGGTACGAGAAATCTCAGCCGTTGAAGTCAAGATCAATGAAAGATGGATCTAGAAGGATTGATATAGAGAAGTTAAAGAGGTTAAGCATGGATGGGAGAACGACGGCGTGGAGTGTAAAGAGGTTGGTTAGTTATGTGATGTCGTCGGGATTGTCGACTATTTCGAGGACGGTGGATGAATTTTCTGAGGCGGAGGCGGAGATAAATAGTGAGTGGGAGGCTAGGACTTGTGCTCAGAGGATATTCAAGAATGTTGCTAAGGAAGGAGCCAAGTACCTAGAAGAAGAAGATTTACTGAGATTCTTGAAGAGAGACGAAGTGTACATGATATTTCCTTTATTTGGAGGGGCACTTGAAACTGGAAAAATTACCAAGTCCTCATTTCGAAATTGGGTGGTACATGCTTATGTAGAGAGAAAAGCATTGGCTCATTCATTGAACGATACTAAAACAGCGGTTCGACAGCTACACAAACTTGCGAGTGCAGGAGTAACAGTTATAATAACTGTGGTGTCTCTCTTGGTGATGGGTTTGGCCACAACTAAAGTCATCTTCGTGGTCACTTCTCAACTGTTGCTCGTAGGTTTTGTGTTCCAAAATATGTGCAAAACTGTGTTTGAATCCATTATCTTTGTCTTCCTCATGCACCCTTTTGATGTCGGAGATCGTTGTGTCGTTGATGGCATTCAGATGATTGTAGAAGAGATGAATATATTGACAACAGTGTTCTTAAGATATGACGGCGAGAAAATATATTATCCGAATTCAGTTCTTCTGACAAAACCTATAAGCAATTTCAGAAGAAGCCCAGATATGGCTGACGCTGTGGAATTCACTATTGACGCTTCTACTTCTATGGACAATATCACTGCCCTCAAAAAGGCCATTCAAGCGTACATTGAGAGCAAACCCAAGTACTGGAATCCAAAACACGTAGTGATAGTGAAGGAGATAGAGAATATGGACAAAATGAAGATGGCTCTTTGTGTTCAACATACCATTAACCATCAAAACTTCGGCAAGCGGAATAGTCGACGATCAGAGCTTTTGCTCGAGCTCAAGAAGATCCTTGAGAGCCTTGGCATTAAGTACCGTCTTCTTCCTCAAGAAGTACAACTCACACAGGTTAACTTTGGCAACAATAATGGATCCTTCCCACTCTCATCTTCGTAA 2163 0.4239 MELNKLEIPKTNSDQVLINVEHLHHQQQSPSPKQEYSSQQPYHHHHPRNITLQRLNFSKPRSRFEEINYPISTPKPTYNNPIPESDDHPPENPTNNDNNSSDDDDDDDDEWFENLDEYGKEDEETTAKSRKKRKLKINKRALLEWTLFLTIMTCLICSLTIKSLKNQTQWSLEIWKWCLLVMVIFCGRLVSAWVVRILVFLIERNFMLREKVLYFVFGLRKSFRNCVWLALVLTAWMIMFHDAHKKHEVLKKFFRFLVAILIGATIWLLKIVLVKVLASSFHVAAFFDRMKESVFHHYVLDALSGPPLDEEEMDLPTRHLQASRSMPARLRYEKSQPLKSRSMKDGSRRIDIEKLKRLSMDGRTTAWSVKRLVSYVMSSGLSTISRTVDEFSEAEAEINSEWEARTCAQRIFKNVAKEGAKYLEEEDLLRFLKRDEVYMIFPLFGGALETGKITKSSFRNWVVHAYVERKALAHSLNDTKTAVRQLHKLASAGVTVIITVVSLLVMGLATTKVIFVVTSQLLLVGFVFQNMCKTVFESIIFVFLMHPFDVGDRCVVDGIQMIVEEMNILTTVFLRYDGEKIYYPNSVLLTKPISNFRRSPDMADAVEFTIDASTSMDNITALKKAIQAYIESKPKYWNPKHVVIVKEIENMDKMKMALCVQHTINHQNFGKRNSRRSELLLELKKILESLGIKYRLLPQEVQLTQVNFGNNNGSFPLSSS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1297 720 MobiDBLite consensus disorder prediction 19 58 - -
Mibi04g1297 720 MobiDBLite consensus disorder prediction 98 120 - -
Mibi04g1297 720 Pfam Mechanosensitive ion channel 488 693 IPR006685 GO:0016020|GO:0055085
Mibi04g1297 720 Gene3D - 547 596 IPR023408 -
Mibi04g1297 720 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 27 706 IPR016688 -
Mibi04g1297 720 MobiDBLite consensus disorder prediction 19 130 - -
Mibi04g1297 720 SUPERFAMILY Sm-like ribonucleoproteins 537 596 IPR010920 -
Mibi04g1297 720 FunFam Predicted mechanosensitive ion channel 547 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1297 Mibi-ChrMibi04 32790156 32798445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1297 28 707 Mechanosensitive Ion Channel Family AT5G12080 45.804 0.0 588