Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1290 ATGGCCGGCCTTGACTTAGGTTCAGCATCTCATTTTGTTCATCAGCTTCATCATCAACGCCCTGATCTTCACTCAAACAACCATGAAGACGACGGCGACAACCACGACGACGACGATCCTCAAGGCCTTGACCTAGTTTCGCCGAACTCCGGCGGATCCGGTGGCGGCGGGAGTGGAAGCGGCGGGAGCGGTCGGAGGCCGAGAGGCCGGCCACCGGGGTCGAAGAACAAGCCGAAGCCGCCGGTGATCATCACGAGGGAGAGCGCGAACACGCTTAGGGCACACATCCTGGAGGTCAGCGGCGGCTCCGACGTGTTCGAGTCGGTGGCGACCTACGCGAGGAGGCGGCAGCGGGGGATCTGCGTCCTCAGCGGCAGCGGCACGGTCACCAACGTGACGTTGCGGCAGCCGGCGGCGGCCGGCGCGGTCGTGACTCTCCACGGGAGGTTCGAGATTTTGTCGCTGGCCGGATCTTTCTTGCCGCCGCCGGCACCGCCGGGGGCCACCAGCCTGACGATATTCCTCGCCGGAGGGCAAGGTCAGGTTGTGGGAGGGAATGTTGTTGGTCCTTTGGTGGCAGCTGGGCCTGTTATTGTAATTGCTTCCTCATTTTCAAATGTTGCTTATGAGAGATTGCCCTTAGATGAAGAAGAGCCACTTCAGATTCAGCAAGGTCAATCTTCCGGCAGTGGCGGTGCCGGCGCCGGCGGCTCGTTCCCGGACCCGTCTTCGGGGCTTCCGTTCTTTAATTTGCCGTTAAATATGCCGCAGTTGCCGGTCGACGGTTGGGCCGGAAACTCCGGTGGTGGTGGTGGTGGTGGGAGGCAACCATATTAG 837 0.6141 MAGLDLGSASHFVHQLHHQRPDLHSNNHEDDGDNHDDDDPQGLDLVSPNSGGSGGGGSGSGGSGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSGGSDVFESVATYARRRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLAGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGPLVAAGPVIVIASSFSNVAYERLPLDEEEPLQIQQGQSSGSGGAGAGGSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSGGGGGGGRQPY 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1290 278 Gene3D - 92 227 - -
Mibi04g1290 278 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 221 - -
Mibi04g1290 278 ProSiteProfiles PPC domain profile profile. 89 226 IPR005175 -
Mibi04g1290 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 25 230 IPR014476 GO:0003680
Mibi04g1290 278 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
Mibi04g1290 278 CDD DUF296 93 176 IPR005175 -
Mibi04g1290 278 FunFam AT-hook motif nuclear-localized protein 92 219 - -
Mibi04g1290 278 MobiDBLite consensus disorder prediction 219 252 - -
Mibi04g1290 278 MobiDBLite consensus disorder prediction 21 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1290 Mibi-ChrMibi04 32567676 32568512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1290 1 278 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 61.794 3.87e-98 288