Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1274 ATGCCTCCGAGGAAGAAACCCAGTTCTTCTTCCAAGAAATCGAATCCGAACAGCGAGGCTCAACCTTCCAAGTTTGGCATTCAACACTTTTTTGAGCGCCACACTCAGAATGCTCTTCTGGCCTCTCAGAAGCAGCAAAAAGATGATGCATCTGTGAATCATCCCGTTTCTGCCATCCATGATTCCAAATCTGTTGCACCTATTAACTCTCATGTTTCTTCTGTTACTGGGTCGCAAGCTGTTGCTCCAAATAGTTTATCTTCCGTTCTTCCCAGAGCTGAATATAATTTGAAATCAGACATGGCTGGGCCAAAAATGGGGAATTCAGAATCGCAAAAGCTTGAAGACATCCTGCCCGTAGGAGCAAATGAATCCAATAACGCGTCACAGAATACTCCTTCAGAGAATTTGTCAATACCAGGGTTTGATGCAGTGGAAAATCTCCCTGAGGCGTCTCCGGAAATTGCTAATATTGTGCCCCATAAGCGCTCTAAGTTCTCGCCTGGGATGTTCATAAAGCAAAGCCAGGATGATGGGGTTGATGAAGTTACATGGAAGATATCTCCTGTGAATGAAAGACTTCAAGCAGTTTCAAAACACATGCCGAATATAATTCAAGCTTTGGCTGAATCTTCTCGAATCAACTTATTGCCTAGGATGGTGCAGACTTCTCTGAATAAAGGTGGCAAGTTTGAAAAGTTACTTGCTTCACCAGCTACAAAGGATGCTGAGAGGTCAACAGTGTCTAAGAATGAAAAACGCTTGAAACGTTCAAACCCAGACCCAGACATAGTTTTTAATGTCTGTGCAACTACTGTGAATGATTCTGGCAAAATTACTAAACAGAGCCCCTTCAGAACTCCGCCATCTTTATCTTATTGCTCTGACAAGGCATTACTCGAACTGTTAGATCAAGTTGAAGATGCCATATGTGTTGAAGATGCTACAATTTGTGATAAAAGTTCAAATTACATCAAGTCTCAAGATGGAATTGCTGATAATCTGCCCATCAGAGTTGATTCTGCAGCAGAAAGAACTATAATTCATACACCAAAAGAGGCCATTGGTGGGTCCAATTCTAATTATTTGGTGTTAGAGGTATCCGAAAACCATGGGCTTGCTAATTCATCTGCTTTGCGAGGCCCATATAAGGTGCTTCGTTTAGTGAATGAAGAAACTGGAGAAGAGAAGGCTGTAAACTTGTTAGACGAATGTGTTGTTGCACCTGGAGATACTGTGAATATAATTGGCCAATTTGGTGATCAGGGGCATTGTGATGTAGATCATGATAATAATTTTTTGATTGTACATCCAGATATTCTGGTGTCTGGATCTCGGGTAGCTGCTAGTTTTACTTGTCCAAGGAGAACTGTGTTAGATGAGAGGCTAAAATATAATGAGTACTCAATTGCTGCATTAACTGGAACGTTACTTCATCAAATTTTTCAGGCTGGACTTATCAAGGATAGTCCTACAATAAACTTCTTAGAGGAATATGCACGATTGGTTCTACACAGAAACATTGAAAGCTTGTATGCCTGTGAAGTGAATGAAAATGATGTACACAAGACCTTGATAGATGCTATCCCGCGATTGTTAAATTGGATCAAACTGTTCAAGAATTCGGAGGAAAAGAAAGATGCTTATGTTGAATTTGGATGCGATGATGGTATAAAGAAAGTTGAAATATCCGAGGTGATTGATATTGAGGAAATGGCATGGGCTCCTAAATATGGTCTCAAAGGGATGATTGATGCTTCTGTCAGTGTGAAAGTTCTAACAAAGGGAAGTGAAGCAGATGAGAAGGTCATGCCATTAGAATTTAAAACTGGGAAAGCAATGTCTGGCCAGTCATCGATAGAACACCGCGCCCAAGTGATTTTGTACACTCTTCTGATGTCTGAGAGGTACCTGAAGACTATTGATTCTGGTCTTCTATATTATCTCCGGTCAGATCAGACAGAGGGCATTGTGGTTCAAAGATCTGACTTAGTTGGGCTAATCATGCGACGTAATGAGCTTGCGAGTGATATTTTGAAGGCACTGACCACACAACAGTTGCCTCCAATGTTACAGAGTCCAATCATTTGCAGAGGTTGTCGTCATCTTAATGTTTGCAGCATTTATCATAAGGTTCAAGGAGGAAGTGCGAAGAGTAGTGGATTGGGAGATGTGTTTGATTCACATACTAATCACCTTTCACCTACTTATTGTAAGTTCCTTTGTCGTTGGGATCGGCTGATTGATTTAGAAGCAAAAGAGACTGAGCTTGTGAAGAAAGAGATGTGGCGATCACATACTTTTAAAAGTCATTACAGCACTGGCCTTTCTTCTGTCATCCTTGATGCTTCAAATAAGATTCCATGTCAGAAATCTATTAAAGATAATTGTTTCATTTATCGTTTTGTACAATGTGGTCCATCTTCTCTATCTGAAGTGTCTGATGGTGATCCTTCTAGTGCTTCTACAAATTACTTGGACCTCAAACTAAGAAGTGGAGACTATGTGATATTGAGCACTGAATCTAGCCGTCAAGCTGTTGCTAGTGGTGTGATTACAGATATTAGTCATGCCCATGTTTCTATTTCCTTTTCAAAGCGCCTGCGGATTCCTGGAAGCATCTCCTCTAGCCAAGATCTCTGTAAGCAGGTTTGGAGAATTGATAAGGATGAAACTGTTACATCATTCGCTATTATGAGGTTTAATCTAGTACAACTTTTTCTACAAAATGCACAAAGTACTCATCTGAGGAAGATGATTGTTGATCTTGAGGCTCCCAAATTTGACAGTGGATCCATGGTCAGTCAGGACCCAGCAATATCATATGTCTGGTCAGAGAAGAGTTTGAACGATGACCAGCGTAGATCAGTCCTCAAGATTCTCACGGCAAAGGATTATGCACTCATACTTGGAATGCCTGGAACGGGAAAGACATCGACCATGGTCCATGCTGTGAAAGCATTATTAATCAGAGGCACATCTATTTTGCTGACAGCCTATACAAACTCTGCAGTAGATAATTTACTTATCAAGTTAAAAGCTCAGGGAATTGATTTTGTACGTATTGGAAGACATGAAGCTGTGCATGAGGAGGTCAGAGAACACTGCCTTTCAGCAACAAATGTACAAAATGTTGATGAGATCAAAGTAAGGTTAGAACAAGTCAAAGTAGTTGCAGTTACATGTCTGGGCATCACAAGTCCCTTGCTTGCCAACAGGACTTTTGATGTATGCATTATGGACGAAGCTGGGCAGACAACTCTACCAGTGTCCTTGGGTCCTCTCATGTTTTCCTCAATGTTTGTGCTTGTGGGTGATCACTATCAACTACCTCCGCTTGTCCAGAGTGCAGAGGCTCGAGAGAATGGAATGGGGATAAGTTTATTTTGTAGGCTTTCTGAAGCACATCCACAAGCCATTTCAGCATTACAGAGTCAGTACCGTATGTGTCAGGGCATCATGGACTTGTCAAATGCCTTGATATATGGTGATCGGTTAAGGTGCGGTTCCACTGAGATTGCTAATGCAAAACTTGACTTTTCTACCTTAAAATGTGGCTTACCTTGGGTAAAAAATGTATTAAATCCAGGCAGGCCAGTGATATTCATTGATACTGATAAATTGCCCGCTTTAGAGACGAGAGAACAGAAAACTATAAATAACCCTGTTGAAGCTCACATAATCGTCGAGATAGCAAAGGCATTAGTAAAAAATGGAATTGGAGAAGAACATGTTGGCATTATTACCCCCTATAATTCCCAGGCAAATCTCATCCGTCAGGCTGCTTGCATGACTTCGTTGGAGATTCATACCATTGACAAATACCAGGGTAGAGATAAAGATTGTATATTAGTATCTTTCGTGAGGTCTAGTGAAAATCCATCAAGCTGTGCTTCTTCTCTGCTTGGAGACTGGCACAGGATAAATGTGGCTCTCACACGTGGCAAGAAAAAGCTGATCATGGTAGGTTCTTGTAGAACCCTATCAAAGGTTCCATTACTGAAGCTTCTCATAAGAAAGGTTGAGCAACAATCAGGTATAGTTAGTGTGCCTAAGAAGGATGTATATCAGAAAGGGGAGCTCAAAAGGTGTTCCCAGATGAGGTAA 4107 0.4108 MPPRKKPSSSSKKSNPNSEAQPSKFGIQHFFERHTQNALLASQKQQKDDASVNHPVSAIHDSKSVAPINSHVSSVTGSQAVAPNSLSSVLPRAEYNLKSDMAGPKMGNSESQKLEDILPVGANESNNASQNTPSENLSIPGFDAVENLPEASPEIANIVPHKRSKFSPGMFIKQSQDDGVDEVTWKISPVNERLQAVSKHMPNIIQALAESSRINLLPRMVQTSLNKGGKFEKLLASPATKDAERSTVSKNEKRLKRSNPDPDIVFNVCATTVNDSGKITKQSPFRTPPSLSYCSDKALLELLDQVEDAICVEDATICDKSSNYIKSQDGIADNLPIRVDSAAERTIIHTPKEAIGGSNSNYLVLEVSENHGLANSSALRGPYKVLRLVNEETGEEKAVNLLDECVVAPGDTVNIIGQFGDQGHCDVDHDNNFLIVHPDILVSGSRVAASFTCPRRTVLDERLKYNEYSIAALTGTLLHQIFQAGLIKDSPTINFLEEYARLVLHRNIESLYACEVNENDVHKTLIDAIPRLLNWIKLFKNSEEKKDAYVEFGCDDGIKKVEISEVIDIEEMAWAPKYGLKGMIDASVSVKVLTKGSEADEKVMPLEFKTGKAMSGQSSIEHRAQVILYTLLMSERYLKTIDSGLLYYLRSDQTEGIVVQRSDLVGLIMRRNELASDILKALTTQQLPPMLQSPIICRGCRHLNVCSIYHKVQGGSAKSSGLGDVFDSHTNHLSPTYCKFLCRWDRLIDLEAKETELVKKEMWRSHTFKSHYSTGLSSVILDASNKIPCQKSIKDNCFIYRFVQCGPSSLSEVSDGDPSSASTNYLDLKLRSGDYVILSTESSRQAVASGVITDISHAHVSISFSKRLRIPGSISSSQDLCKQVWRIDKDETVTSFAIMRFNLVQLFLQNAQSTHLRKMIVDLEAPKFDSGSMVSQDPAISYVWSEKSLNDDQRRSVLKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRHEAVHEEVREHCLSATNVQNVDEIKVRLEQVKVVAVTCLGITSPLLANRTFDVCIMDEAGQTTLPVSLGPLMFSSMFVLVGDHYQLPPLVQSAEARENGMGISLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLRCGSTEIANAKLDFSTLKCGLPWVKNVLNPGRPVIFIDTDKLPALETREQKTINNPVEAHIIVEIAKALVKNGIGEEHVGIITPYNSQANLIRQAACMTSLEIHTIDKYQGRDKDCILVSFVRSSENPSSCASSLLGDWHRINVALTRGKKKLIMVGSCRTLSKVPLLKLLIRKVEQQSGIVSVPKKDVYQKGELKRCSQMR 1368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1274 1368 Gene3D - 443 707 IPR011604 -
Mibi04g1274 1368 MobiDBLite consensus disorder prediction 245 259 - -
Mibi04g1274 1368 MobiDBLite consensus disorder prediction 1 28 - -
Mibi04g1274 1368 PANTHER DNA2/NAM7 HELICASE FAMILY 116 1343 IPR045055 -
Mibi04g1274 1368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 948 1333 IPR027417 -
Mibi04g1274 1368 CDD SF1_C_Upf1 1149 1342 IPR041679 -
Mibi04g1274 1368 CDD DEXXQc_DNA2 948 1148 - -
Mibi04g1274 1368 Pfam DNA replication factor Dna2 396 590 IPR014808 -
Mibi04g1274 1368 FunFam DNA replication helicase 1147 1360 - -
Mibi04g1274 1368 Pfam AAA domain 1051 1116 IPR041677 GO:0004386
Mibi04g1274 1368 Pfam AAA domain 949 1040 IPR041677 GO:0004386
Mibi04g1274 1368 MobiDBLite consensus disorder prediction 237 259 - -
Mibi04g1274 1368 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 1045 1146 - -
Mibi04g1274 1368 Gene3D - 1046 1146 IPR027417 -
Mibi04g1274 1368 Gene3D - 876 1045 IPR027417 -
Mibi04g1274 1368 Pfam AAA domain 1126 1325 IPR041679 -
Mibi04g1274 1368 MobiDBLite consensus disorder prediction 7 24 - -
Mibi04g1274 1368 Pfam Domain of unknown function DUF83 592 707 IPR022765 -
Mibi04g1274 1368 FunFam DNA replication helicase Dna2 553 707 - -
Mibi04g1274 1368 Gene3D - 1147 1354 IPR027417 -
Mibi04g1274 1368 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 891 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1274 Mibi-ChrMibi04 31849574 31868977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1274 1 1090 Core DNA Replication Machinery Family AT1G08840 54.078 0.0 1088