Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1249 ATGCTTGCCACTATTGCGTTTCCCTCCGTCATCCCTTTCCGAATCGCTACCAATAAACCATCCGAATTAAGTTCAACCAATTATTCTCCTCTGAAGCTCAGAGCATCTGTCCACGACTATCCACTGGCAAGCAAAATTGTGGTAAAAAATTTACCATATTCTGCTGGTGAGAATATTCTGGAGAAGGAATTTTCAAACTATGGCGAGATAGCTGAAGTTAAAGTCGTTAAAGATACCACAAAAAGATCCAAGGGATATGCCTTTATTCAGTACACCAGTCAAGAGGATGCAATGCTTGCACTAGAAAACATGGATCAAAAGGTACTTGATGGACAGAAAATATATGTAGAAATTGCAAAACCTGGAAAGGATGCTTTTCGGGGCCTCCTAAAGACCTCTGGCCCCCCAAAGAAGTGGCATAAGTCAGATCAAGAGGAAGTGGCGGATTGCTGGTACTGA 459 0.4227 MLATIAFPSVIPFRIATNKPSELSSTNYSPLKLRASVHDYPLASKIVVKNLPYSAGENILEKEFSNYGEIAEVKVVKDTTKRSKGYAFIQYTSQEDAMLALENMDQKVLDGQKIYVEIAKPGKDAFRGLLKTSGPPKKWHKSDQEEVADCWY 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1249 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46 114 IPR000504 GO:0003723
Mibi04g1249 152 CDD RRM_SF 46 117 - -
Mibi04g1249 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 121 IPR000504 GO:0003723
Mibi04g1249 152 Gene3D - 31 146 IPR012677 -
Mibi04g1249 152 SMART rrm1_1 45 117 IPR000504 GO:0003723
Mibi04g1249 152 SUPERFAMILY RNA-binding domain, RBD 44 125 IPR035979 GO:0003676
Mibi04g1249 152 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 24 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1249 Mibi-ChrMibi04 30695597 30698708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1249 43 124 Eukaryotic Initiation Factors Gene Family AT4G34110 31.707 1.84e-08 50.4