Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1227 ATGGAAGCAGAACAAGAAGAACCAGAACATCTCCTTCACACTTTACCTCAATCAACCACTCCTTCTTCTTCCTCCTCCTCCAACACTGTCACTGAAGCCATTAATGTAGACCATGTAGCTCAAATAGAAGGGAAGGTGAAAAAGAAGAAGAAGAAGAAAAATTCTACCACTAAGAAGAACACAGACAAGGAAGAGAAGCACCCAACGTACAGGGGAGTACGCATGCGACAATGGGGGAAATGGGTTTCAGAAATTAGAGAACCAAGGAAGAAATCAAGAATATGGCTAGGAACTTTTTCCACTGCGGAAATGGCTGCTCGAGCTCACGACGTCGCAGCTCTTACCATCAAAGGCACCTACGCCTTCCTAAACTTCCCGGAGCTCGCCGGGTTGCTCCCTCGTCCGGCAAGCAACTCCCCGAAGGACATCCAGGCCGCGGCAGCCAAGGCAGCCGCCCTCAATTACCATATTGATACACATCGACCCGAACCTGACTCTGATACCACGCAGGCTGATGACTACGGGACTCCCCCGTTGTCACGCTCGCCGTCTACTGAGGAGGAGGACGACACATTCTTCAACCTACCCGATATCTTGAGTAGTTGCGGTGGCGGCAGTGGCGATGGCTCCTCACTGTGGCTCCTAGCCGGCGCCGATTATAGAGACTCAGGTCTCCAGGTTGAAGAGCCATTCCTATGGGATTAA 705 0.5135 MEAEQEEPEHLLHTLPQSTTPSSSSSSNTVTEAINVDHVAQIEGKVKKKKKKKNSTTKKNTDKEEKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGTYAFLNFPELAGLLPRPASNSPKDIQAAAAKAAALNYHIDTHRPEPDSDTTQADDYGTPPLSRSPSTEEEDDTFFNLPDILSSCGGGSGDGSSLWLLAGADYRDSGLQVEEPFLWD 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1227 234 Gene3D AP2/ERF domain 69 127 IPR036955 GO:0003700|GO:0006355
Mibi04g1227 234 MobiDBLite consensus disorder prediction 158 190 - -
Mibi04g1227 234 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 49 201 - -
Mibi04g1227 234 CDD AP2 70 128 IPR001471 GO:0003700|GO:0006355
Mibi04g1227 234 ProSiteProfiles AP2/ERF domain profile. 69 126 IPR001471 GO:0003700|GO:0006355
Mibi04g1227 234 MobiDBLite consensus disorder prediction 12 35 - -
Mibi04g1227 234 Pfam AP2 domain 68 118 IPR001471 GO:0003700|GO:0006355
Mibi04g1227 234 MobiDBLite consensus disorder prediction 1 70 - -
Mibi04g1227 234 FunFam Ethylene-responsive transcription factor 2 68 127 - -
Mibi04g1227 234 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Mibi04g1227 234 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Mibi04g1227 234 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Mibi04g1227 234 SUPERFAMILY DNA-binding domain 69 127 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1227 Mibi-ChrMibi04 29620089 29620793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1227 58 232 AP2-EREBP Transcription Factor Family AT2G44940 45.933 1.08e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi04g1227 AP2 4.6e-13 CL0081