Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1221 ATGAGCTTCTGCGTACCCACCTGGGGTGTTGACAATAATGTCCCCTCAGCCACCAGAACCTCTCTTCCTTCTAACTCCAACTCCACCGTCCCTGATCTCATCCCAACGTTTGACTATGAAGTTGCTGAACTTACATGGCAGAACGGGCAAATATGGATGAACGGGATGGGCCTACCCCGTCCTCCGGCGAAACCGACCATTCCCGGCATGGCGGCGAATACGAGGCCCGATCCGATGGCCTCCCATTCAAAGTACCGTACTAGTGGCACATTAGAGTCCATAGTCAATCAAGCCACTAGGTTCTCCCAAATCACCAAATCAATGTCACAAACTGTCGACAACGGCGGCTGCCACGTAGACAAATCGGCGCCGTGGTACGAACACCACCGCGGCGGAGGCGGTGGCCACGCCGCCGCGGTATCGAACACAATGACTATGGATGCTATGGTGCCATGCTCTAATCGTACGGACGAGCATAGTACGGCGGTGGTGGATGAATCTATGGGTGGTAGGATCGGCACGGGCCGTGGCGGCGGTGGCGGGGCGGGTTGCTCGGCGCGTGTCGGGTCATGTGGCGGTGCGGTGAGAGTTCCGGCGGTGGCGCGTGTGCCGGTGGGACGCCAGTGGGATCAAAGTGGGAGTGAGAGAGATAGCCATCACGTGACACCTGACACGTGCGATAGGGAAATGGATTTTGGTTATACTTCTGCTTCTATGGGTTCGCCGGAGAATACAAGTTCCATAAGGCTGTGTACCAAGACGACCGTTGCTGATGACCATGATTCTGTTTGTCACAGTACACAGAGAGAAGAAGATGAGGAGGAGGAGGAGGACAAAAAAGAAAGAACTGTAAAATCTTCATCGTCCAACAAACGGCGTAGAGCTGCTGATGTTCACAACCAGTCTGAAAGAAAAAGGCGAGACAAGATTAACCAAAGGATGAAGACATTACAGAAGCTTGTTCCAAATTCCAGCAAGACTGATAAAGCTTCAATGCTGGATGAGGTAATAGATTATGTGAAGCAACTTCAAGCACAAGTGCAAATGATTAATAGAATGAGTCTATCTTCCATGATGCTGCCAATGACCTTGCAACAACAACAACTTCAACTCATGTCCATGATGGCTCCAATGGGGATGGGATTAGGCATGGATATGAACACTATGCCTCGCCCTAACATCCCCACAGTCCCTCCAATTCTCCACCCTTCTGCTGCTGCCGGCTTTATGCCGATGGCCTCCTCATGGGACCCTTCTACCGCCGGAAATCGGCTTCAAGGAGCAGTGCCTGACTTCTTGTCCTCATTCCTAGCATGCCAGACACAGCCCATGACCATGGATGCATACAGTCGAATGGCTGCTATTTATCAACAAATGCAACAAGCTCCAGCATCAAGTTCCAAGAACTGA 1410 0.5177 MSFCVPTWGVDNNVPSATRTSLPSNSNSTVPDLIPTFDYEVAELTWQNGQIWMNGMGLPRPPAKPTIPGMAANTRPDPMASHSKYRTSGTLESIVNQATRFSQITKSMSQTVDNGGCHVDKSAPWYEHHRGGGGGHAAAVSNTMTMDAMVPCSNRTDEHSTAVVDESMGGRIGTGRGGGGGAGCSARVGSCGGAVRVPAVARVPVGRQWDQSGSERDSHHVTPDTCDREMDFGYTSASMGSPENTSSIRLCTKTTVADDHDSVCHSTQREEDEEEEEDKKERTVKSSSSNKRRRAADVHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIDYVKQLQAQVQMINRMSLSSMMLPMTLQQQQLQLMSMMAPMGMGLGMDMNTMPRPNIPTVPPILHPSAAAGFMPMASSWDPSTAGNRLQGAVPDFLSSFLACQTQPMTMDAYSRMAAIYQQMQQAPASSSKN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1221 469 CDD bHLH_AtPIF_like 294 359 - -
Mibi04g1221 469 Coils Coil 300 320 - -
Mibi04g1221 469 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 294 343 IPR011598 GO:0046983
Mibi04g1221 469 MobiDBLite consensus disorder prediction 206 228 - -
Mibi04g1221 469 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 41 468 IPR031066 -
Mibi04g1221 469 SMART finulus 300 349 IPR011598 GO:0046983
Mibi04g1221 469 MobiDBLite consensus disorder prediction 259 307 - -
Mibi04g1221 469 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 291 352 IPR036638 GO:0046983
Mibi04g1221 469 Gene3D - 277 354 IPR036638 GO:0046983
Mibi04g1221 469 MobiDBLite consensus disorder prediction 212 227 - -
Mibi04g1221 469 Pfam Helix-loop-helix DNA-binding domain 299 344 IPR011598 GO:0046983
Mibi04g1221 469 FunFam transcription factor UNE10 isoform X1 289 354 - -
Mibi04g1221 469 MobiDBLite consensus disorder prediction 278 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1221 Mibi-ChrMibi04 29375926 29380051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1221 1 450 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 43.469 4.50e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g1221 HLH 8.7e-14 No_clan