Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi04g1212 | ATGGCTTTGACCGTAGATCAGCAACAACCAAACTTAAAGTATTTCTGTAAGATCTGCAAGAAAGGCTTCGGTTGTGGTAGAGCGCTTGGTGGACATATGAGAGCTCATGGCATCGGTGATGACAGCTGGAACCTCGACGACGACGAGGACGCCGCCAGCGACTGGGACGAAAAGACCGCCACCGGAACCGGCGGAAATGACCGGCCGCGCACTAAGCGATTTTATGCCCTAAGAACAAACCCTAACAGGTCAAAGAGTTGTAGGGTTTGTGAAAATTGCGGTAAAGAATTTTCTTCATGGGATTCTTTTCTTGAACATGGAAAGTGCACTTCTTCCAATGACCGCCACGTCATTCAGTCGTCGCCGGTTTCTTCCCAGATGTCCGATGATGACGGCGAAGGCGACGGCGAGAGAGGTTGTGGTTGGTCTAAAAGGAAGAGATCATTCAGAGCCAAAGTAGGTATGTTAAATTCTTCAAGTGAAGATGTTGACATTGCAGCCAACTGTCTTGTGATGTTATCAAATGCCAAATTCGATCCTCGAAACTCCGCCACGGAGGAATCGAGTGCGTCGCCGAGCAGAGAAGAGGAGAGAAGAAGCCCTATCAACTTCATCCCACCGCTATCTTATTGTGTTCCTGCTGTAGTGGATCACAAAGCCAAAAGTGCAGTGACTTCTAAAGGCTTGTTTGAATGCAAAGCATGTAAGAAAACATTCAATTCTCATCAAGCGTTAGGTGGCCATAGGGCAAGTCATAAGAAAGTTAAAGGCTGCTTCGCTTCGAGACTCGACAACGTCGAAGATAAAGATCACGATGATGTCTTAAATCATGAAGAGTTTCTCCCCACAAAATCAAGCTCAATCTCTCATCATCCTTCTTCAAGCAATGCCTCGTTATTTATGGTGTCTTCTTCGAAAAGGAAATCCAAAGTTCACGAATGTTCGATATGTCATCGGACTTTTTCATCGGGACAAGCCTTAGGAGGACACAAGAGGTGTCATTGGATCACACCAAATGTACCAGATTCGTCCACATTCGCTAGGTTTCAACAGTTTCAAGATCATATAGAGAGAATGAATCAAATCCCTAAATTTGATAATTCGGAGCCACTAGATCTAAAGCTTGATCTCAACCTTCCGGCTGCTCCTGAGAATAGTCAGGCAAGGCGGAATTTGGCGACGGAAATTTTCTTGCAACCATGGTTAGGAGGAACAATGGAGAAGGATAAAAGTAGGAACAACAACAATACTAATAGTCAATGCCACAGCCCCAGCAACAGGGAATTACAACACAATGGAACTGAAAAGGACAACAAGGATGGTGACAAAAATAGCAAGAAAAACAGCACGATAATGTCGATGGAAAATGTTGAAGATGAAGCTGATAGTAAAGTGAAGAAGTTAGCGAAACTAAGTGAGCTAAAGGACATGAATATAGGTGGAAGTTCTTCCCCATGGTTGCAGGTGGGGATTGGTTCAACCACTGGTGTGGGAGCCGAACCATAA | 1506 | 0.4482 | MALTVDQQQPNLKYFCKICKKGFGCGRALGGHMRAHGIGDDSWNLDDDEDAASDWDEKTATGTGGNDRPRTKRFYALRTNPNRSKSCRVCENCGKEFSSWDSFLEHGKCTSSNDRHVIQSSPVSSQMSDDDGEGDGERGCGWSKRKRSFRAKVGMLNSSSEDVDIAANCLVMLSNAKFDPRNSATEESSASPSREEERRSPINFIPPLSYCVPAVVDHKAKSAVTSKGLFECKACKKTFNSHQALGGHRASHKKVKGCFASRLDNVEDKDHDDVLNHEEFLPTKSSSISHHPSSSNASLFMVSSSKRKSKVHECSICHRTFSSGQALGGHKRCHWITPNVPDSSTFARFQQFQDHIERMNQIPKFDNSEPLDLKLDLNLPAAPENSQARRNLATEIFLQPWLGGTMEKDKSRNNNNTNSQCHSPSNRELQHNGTEKDNKDGDKNSKKNSTIMSMENVEDEADSKVKKLAKLSELKDMNIGGSSSPWLQVGIGSTTGVGAEP | 501 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi04g1212 | 501 | MobiDBLite | consensus disorder prediction | 114 | 141 | - | - | |
Mibi04g1212 | 501 | MobiDBLite | consensus disorder prediction | 408 | 428 | - | - | |
Mibi04g1212 | 501 | MobiDBLite | consensus disorder prediction | 403 | 464 | - | - | |
Mibi04g1212 | 501 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 314 | 334 | IPR013087 | - | |
Mibi04g1212 | 501 | MobiDBLite | consensus disorder prediction | 49 | 71 | - | - | |
Mibi04g1212 | 501 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 312 | 334 | IPR013087 | - | |
Mibi04g1212 | 501 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 88 | 116 | IPR013087 | - | |
Mibi04g1212 | 501 | MobiDBLite | consensus disorder prediction | 180 | 199 | - | - | |
Mibi04g1212 | 501 | SUPERFAMILY | beta-beta-alpha zinc fingers | 309 | 335 | IPR036236 | - | |
Mibi04g1212 | 501 | SUPERFAMILY | beta-beta-alpha zinc fingers | 14 | 107 | IPR036236 | - | |
Mibi04g1212 | 501 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 232 | 252 | IPR013087 | - | |
Mibi04g1212 | 501 | SMART | c2h2final6 | 312 | 334 | IPR013087 | - | |
Mibi04g1212 | 501 | SMART | c2h2final6 | 88 | 116 | IPR013087 | - | |
Mibi04g1212 | 501 | SMART | c2h2final6 | 230 | 252 | IPR013087 | - | |
Mibi04g1212 | 501 | SMART | c2h2final6 | 14 | 36 | IPR013087 | - | |
Mibi04g1212 | 501 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 14 | 36 | IPR013087 | - | |
Mibi04g1212 | 501 | MobiDBLite | consensus disorder prediction | 477 | 501 | - | - | |
Mibi04g1212 | 501 | MobiDBLite | consensus disorder prediction | 477 | 491 | - | - | |
Mibi04g1212 | 501 | Pfam | C2H2-type zinc finger | 14 | 36 | - | - | |
Mibi04g1212 | 501 | Pfam | C2H2-type zinc finger | 230 | 254 | - | - | |
Mibi04g1212 | 501 | Pfam | C2H2-type zinc finger | 311 | 336 | - | - | |
Mibi04g1212 | 501 | Coils | Coil | 454 | 474 | - | - | |
Mibi04g1212 | 501 | SUPERFAMILY | beta-beta-alpha zinc fingers | 226 | 256 | IPR036236 | - | |
Mibi04g1212 | 501 | MobiDBLite | consensus disorder prediction | 429 | 446 | - | - | |
Mibi04g1212 | 501 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 230 | 257 | IPR013087 | - | |
Mibi04g1212 | 501 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 16 | 36 | IPR013087 | - | |
Mibi04g1212 | 501 | MobiDBLite | consensus disorder prediction | 114 | 128 | - | - | |
Mibi04g1212 | 501 | PANTHER | OS02G0659100 PROTEIN | 5 | 495 | - | - | |
Mibi04g1212 | 501 | Gene3D | Classic Zinc Finger | 11 | 109 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi04g1212 | Mibi-ChrMibi04 | 28981658 | 28983163 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi04g1212 | 144 | 419 | C2H2 Transcription Factor Family | AT1G02040 | 34.657 | 9.61e-33 | 125 |