Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1208 ATGGATTATTCCACATACCAACAGCATCAGCAGCAGCAACAAGAACAACAACAAGGCTACGACACATCTCAAAATCAAGCCTTTGATCAATCTTCTCAATCTTATTATGCCTACAATCAACAACAATACGACCAGCAGCAATACGCATACTATTCCAGTCAAGACCAAGCAAATTCATATGTCCACCAATCATATCATCAAGAACCCACCACAATTCACCCTCCTGGAGTCCCAATACCTCCTCCTGAACAATCCCAGATTCAAAATCAACACCAGGATTCAGGTGGCGCAATGAATCCTGCTGCTGCAGCTGTTGCTATAGCTGCTCTCTCACAGCTCACTCAGTTTTCTGGAAACCCTCCGATTGGGCAGTCTCGATACAGAGGCGGCGGCAGGGGCAGTAGACCATTTAGACGTGGTGGTCGTGGCCATTTCAATCCCCGAGGTCGTGCCCCTTACCGTGGTGGGGGACGTGGCCATGGGGGTGGTAGGCACTTCCCATCCCATTCTTCAGAATTTGTACCAGCTGCTGTTGGAGGCACACCAATGGCACAACAACCTTCATTGTCAGTATCTGGGCCGACTTCAGCTCAGGTTCCAGCTGCAACATTGCATCCTCCAGCATGTAAATTTTGGTGTGAAATTTGCAAGGTTGAGTGCAATTCTGCTGAGATTATGGAGCAACATAAAAATGGAAAGCGGCATAAAAAGAATTTGCAGGTACATGAGGAATTACAGAAGCGGAAAGCTATTAATGGACATCAGAGTAGCCAGATGCCCTCTTCTCAATTGGATGCAACTACTCAGGGTGAGAAAGCTCTTGAATTGAACACAGAAGGGCGTCCAGCAGAAAATATGATCTCTGGAGCAACAGCTGACATTCCCAACAATGAACTTGATTTGCAGAACATAGGAGAAACTTATGAAGTTCCAGCTGATGAGGAAAAACCTAGGGATGATTTGGCTTCAAGGGGTCGCGGTTCCAAGCGAAAGATGAGGGGAGGCAGAGGAGGTAAATTCATAAGAGGTAGTGATGGGTCAAGAAAGCCAGTGGAGCCTCGAAAACCTAAACAGGCTATATCTTTCGTCTGTGAGTTGTGTAATGTTATATGTGAGTCACAGGTTGTTTATGACAGTCATTTGACTGGTAAAAAGCACCAAGCGAATCTCAAGCGTGTCCATGGACACCAAGCTGTGTCCCAAGAACCAGTGCCGCAAGCAGTTCTCCCAACGAACACCAATGCTGTATCTAATTCCATTGACATCAATGCTCTTGCAAATTCAATTAACACTCAAGTCCAACAAGGTGTTAATGATCCACAAGTCCTCTTGGCTCAGCTCCTTATGACAGTACTGTCTCAAGCTCAAGCACCATCAACAGCAGCAGCACCGACAGGATCAGTAGCCGCACAACTTTCAGCACTCATGCCAGGAGCTGGCTCAAGTTATGGACCACCATTTCAAAATGTCCCGCTGACACAAGTGTCAGAAACTGCTGCACAGAATGGGAATGAAAATCCCACAGGGAAAGCAAAAGATCAGGTGCTATCTGACCCACCGCTGGCTCATGCTCCTCAAACTGCAGGTGGAAGCTCTGAAGCCGAAGAGAAGGTACATAAAACACCCACAGAAAATCCAAGTGCTGATAATGAGCAAGGACCTTCAGCGGGCAATGCTTCTACTTCGTAG 1689 0.4689 MDYSTYQQHQQQQQEQQQGYDTSQNQAFDQSSQSYYAYNQQQYDQQQYAYYSSQDQANSYVHQSYHQEPTTIHPPGVPIPPPEQSQIQNQHQDSGGAMNPAAAAVAIAALSQLTQFSGNPPIGQSRYRGGGRGSRPFRRGGRGHFNPRGRAPYRGGGRGHGGGRHFPSHSSEFVPAAVGGTPMAQQPSLSVSGPTSAQVPAATLHPPACKFWCEICKVECNSAEIMEQHKNGKRHKKNLQVHEELQKRKAINGHQSSQMPSSQLDATTQGEKALELNTEGRPAENMISGATADIPNNELDLQNIGETYEVPADEEKPRDDLASRGRGSKRKMRGGRGGKFIRGSDGSRKPVEPRKPKQAISFVCELCNVICESQVVYDSHLTGKKHQANLKRVHGHQAVSQEPVPQAVLPTNTNAVSNSIDINALANSINTQVQQGVNDPQVLLAQLLMTVLSQAQAPSTAAAPTGSVAAQLSALMPGAGSSYGPPFQNVPLTQVSETAAQNGNENPTGKAKDQVLSDPPLAHAPQTAGGSSEAEEKVHKTPTENPSADNEQGPSAGNASTS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1208 562 MobiDBLite consensus disorder prediction 62 99 - -
Mibi04g1208 562 SUPERFAMILY beta-beta-alpha zinc fingers 211 242 IPR036236 -
Mibi04g1208 562 MobiDBLite consensus disorder prediction 309 354 - -
Mibi04g1208 562 MobiDBLite consensus disorder prediction 309 327 - -
Mibi04g1208 562 Pfam Zinc-finger of C2H2 type 362 386 - -
Mibi04g1208 562 Pfam Zinc-finger of C2H2 type 211 235 - -
Mibi04g1208 562 SMART ZnF_U1_5 359 393 IPR003604 GO:0003676|GO:0008270
Mibi04g1208 562 SMART ZnF_U1_5 208 242 IPR003604 GO:0003676|GO:0008270
Mibi04g1208 562 MobiDBLite consensus disorder prediction 500 562 - -
Mibi04g1208 562 SUPERFAMILY beta-beta-alpha zinc fingers 357 393 IPR036236 -
Mibi04g1208 562 Gene3D Classic Zinc Finger 205 244 - -
Mibi04g1208 562 Gene3D Classic Zinc Finger 347 392 - -
Mibi04g1208 562 PANTHER OS06G0651300 PROTEIN-RELATED 7 416 - -
Mibi04g1208 562 MobiDBLite consensus disorder prediction 1 39 - -
Mibi04g1208 562 MobiDBLite consensus disorder prediction 545 562 - -
Mibi04g1208 562 MobiDBLite consensus disorder prediction 115 164 - -
Mibi04g1208 562 SMART c2h2final6 362 386 IPR013087 -
Mibi04g1208 562 SMART c2h2final6 211 235 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1208 Mibi-ChrMibi04 28812936 28821073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1208 166 390 C2H2 Transcription Factor Family AT5G61190 21.456 3.00e-07 51.6