Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1177 ATGTCAGGGGCTCGTGGCGCCGCGAAGAAAAAGCCCCCACCATCGTTGCCACAGAAGAGAAAAACCCATGATTCTAATTCAACCCAAAATCCTAAACTCCTCAAGTGCACAGTAAGTACTAAATGTGCCTACATTAAAGATTCCGAGAAGACACAAGAGCCAACAAAAGAAGATGTGAGCAATGGTTGCTTGACAGTGAAGAGAATGCACATTGTAGATTCCCAAGAGAATATTGAAGAAATGAAGAAAAGAGTTTCTCTTTTGAAGAAGAAGCCTTCAGATTTTGACCCGAGGTTGATATCTTGTTGGGATAAGGGTGAAGATGTGCCCTTTCTGTTTCTCTGTTTGGCTTTTGACATGATTGCTGAAGAAACAGGGCGGATTGTGATTACAGATATAGTGTGCAATATGTTGAGGACTGTCATGTACACTACACCTGATGATTTAGTGGCTGTTGTTCATCTTTCCGCAAATAAGATTGATTCGGCAGATAAAGGGTTGGCATTGGGGATAGGGGATAACATAATTATTGAGGCGCTTGCTGATGCATTTGGAAGAAGTAAGGATCAGATAAAAGATCAGTATAAGGAAAATGGTGACTTGGGCCTTGTTGCCAAAGCACGCCGCTCATCTCAATCAATGATCCGGAAGCCTGATCCATTAACTATTAAGATAGTTTCAGAAACATTTCGTCTTATTGCTGAGGTACAATGCATCACATTTTCAAAGTTGCGGATTGGGTACGCCGAGCAAACCCTATTAGCTGCAATTGGTCAGGCTGCAGTATACTCAAGACATTTTGTACCTCCTAAAATTCAGTCCCCTTTAGAAGAGGTAACCTAA 843 0.4176 MSGARGAAKKKPPPSLPQKRKTHDSNSTQNPKLLKCTVSTKCAYIKDSEKTQEPTKEDVSNGCLTVKRMHIVDSQENIEEMKKRVSLLKKKPSDFDPRLISCWDKGEDVPFLFLCLAFDMIAEETGRIVITDIVCNMLRTVMYTTPDDLVAVVHLSANKIDSADKGLALGIGDNIIIEALADAFGRSKDQIKDQYKENGDLGLVAKARRSSQSMIRKPDPLTIKIVSETFRLIAEVQCITFSKLRIGYAEQTLLAAIGQAAVYSRHFVPPKIQSPLEEVT 280
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1177 280 Gene3D - 85 238 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Mibi04g1177 280 MobiDBLite consensus disorder prediction 1 32 - -
Mibi04g1177 280 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 26 235 - -
Mibi04g1177 280 Pfam DNA ligase N terminus 110 235 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Mibi04g1177 280 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 93 269 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Mibi04g1177 280 Coils Coil 71 91 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi04g1177 Mibi-ChrMibi04 27154182 27155874 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1177 1 278 Core DNA Replication Machinery Family AT1G08130 45.706 1.82e-78 251