Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1167 ATGTCCGTCTCATCTACTGCCTCCTTTCCACCGGACCAGCATCTCCTCTCTTCCTCCGACCAGCTCTGCTACGTCCAATGCAACTTCTGTGATACTGTCCTCGCGGTGAGTGTTCCTTGCACCAGTTTGTTCAAGACTGTCACTGTACGATGTGGTCATTGCACCAACCTTCTCTCTGTCGATATGCGTGGCCCGCTTCTTCCTTCTGCCAATCAGCTTCATCTTGGACACACCTTCTTCACTCCCCAGAATCTTCTGGAGGATATTCGAAGTGCACCTTCATCAAATATGGTGATGAATCAGCTACATCATAACCCAAATGATTCTGTTATGACTATGAGTACCATGCGAGCACGACCTGAGGAAATCCCTAAGCCTCCACCGCCTAACAGACCTCCAGAAAAGAGACAGAGAGTTCCATCTGCTTACAATCGCTTCATCAAGGACGAGATCCAACGTATCAAAGCTGGAAATCCTGATATTAGCCACAGAGAGGCTTTCAGTGCTGCTGCAAAGAATTGGGCCCACTTCCCACACATCCACTTCGGACTGATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTCCGCCAGGAAGGAGAGGACGTTCTAATGAAAGATGGGTTTTTTGCTCCAGCAAACGTAGGGGTTTCCCCATTTTAA 663 0.4857 MSVSSTASFPPDQHLLSSSDQLCYVQCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVDMRGPLLPSANQLHLGHTFFTPQNLLEDIRSAPSSNMVMNQLHHNPNDSVMTMSTMRARPEEIPKPPPPNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEDVLMKDGFFAPANVGVSPF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1167 220 FunFam Axial regulator YABBY 129 201 - -
Mibi04g1167 220 SUPERFAMILY HMG-box 129 178 IPR036910 -
Mibi04g1167 220 Pfam YABBY protein 18 184 IPR006780 GO:0007275
Mibi04g1167 220 PANTHER PROTEIN YABBY 6-RELATED 5 196 IPR006780 GO:0007275
Mibi04g1167 220 MobiDBLite consensus disorder prediction 118 139 - -
Mibi04g1167 220 Gene3D High mobility group box domain 122 180 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1167 Mibi-ChrMibi04 26155420 26158854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1167 29 218 C2C2-YABBY Transcription Factor Family AT4G00180 63.333 1.21e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mibi04g1167 YABBY 6.3e-73 CL0114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g1167 04 26155420 26158854 Mibi04g1167 04 26155420 26158854 ECH