Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1154 ATGTTATACCTAGTACTTATGCCTATCTCTGCTTTAAATTCGGTATCTTTTGTGCTTCTCTTCTGTGCTTGCCTCTTTTCCCCTGTTATTGCGACTGATCATTCATCTCCTTTGGATAAAAAGGTGCATGTACTAGCCCTTATTTCCTTCGTTGGTGGATTTTTAATTACAAGCGCAGTTATCATTATATCTGCAGCTATTATTCGATATAGCAAGATATTGAGAAAAGTTTTGATTGCGGAAAGAAAACGAGGAGAAACGCGGGTGAAGCATGGCGATTTTACTTCGATTTGGAATTTTGATGGTCATATTGCATTTGAAGATATCATTAAAGCCACAAGCGATTTTGATATCAAACACTGCACAGGAAGAGGTTCTTCTGGTGAGGTATACAGGGCAAAACTTCCAGGAGGCAAAATTGTTGCTGTGAAGAAACTTCATAGCACTATGCAATCTGAAAATCTGTCCACGTTTCAAAAAAACTTCTACAATGAGACTGAGATTTTGACAGAGATTCGTCATCGAAATATTGTCAAGCTCCATGGCTTTTGTTTAAATATACAGTGCACATTTCTGGTTTATGCATTTATGGAAAGTGGTAGCCTCTTACATGCCTTGAGAAATGATGAAAAGGCTCAAAAGTTAACATGGAGCAAGAGATTCAATATTATCAACGGGATAGCTCACGCTGTAAAATATATGCATCATGATTGTGCCCCACCAATTATTCATCGAGACTTAACAAGTAGTAATATCTTGTTGAACTCAGATATGGAAGCATTTGTCTCAGACTTTGGCACAGCTAGACTCCTAATTGATCCATATTCATCAAACCAAAGTCTTTTGGTTGGTACTTATGGCTATATTGCTCCAGAGTTAGCATATACATTAGCAGTGACTGAAAAGTGCGATGTATACAGCTTTGGAGTAGTTGCATTAGAAACTATGATGGGAAAGCAATCGGGAGAGTTGATTTCATGTTTAAGAAGAAAGGATTATGGAGATCAAAAAATAATGCTACGAGATATTTTAGACCCAAGGCTCTCTCAACCGCACACTTGGAAAGATATTTGGGATGTTGTTATTGTGATGACCGTTGCATTAGCATGCATTTGCGCTGACCCAGATTGTAGGCCATCAATGAAGCAAGTAACTGAGAAACTTTCACTTTCTAGGCCTCTTTTTACGCTCCCATTGTTCAATGATATTTCAATTCAACAATTGATGATTAGTCATGACATGTATAATACCATGTAA 1257 0.3755 MLYLVLMPISALNSVSFVLLFCACLFSPVIATDHSSPLDKKVHVLALISFVGGFLITSAVIIISAAIIRYSKILRKVLIAERKRGETRVKHGDFTSIWNFDGHIAFEDIIKATSDFDIKHCTGRGSSGEVYRAKLPGGKIVAVKKLHSTMQSENLSTFQKNFYNETEILTEIRHRNIVKLHGFCLNIQCTFLVYAFMESGSLLHALRNDEKAQKLTWSKRFNIINGIAHAVKYMHHDCAPPIIHRDLTSSNILLNSDMEAFVSDFGTARLLIDPYSSNQSLLVGTYGYIAPELAYTLAVTEKCDVYSFGVVALETMMGKQSGELISCLRRKDYGDQKIMLRDILDPRLSQPHTWKDIWDVVIVMTVALACICADPDCRPSMKQVTEKLSLSRPLFTLPLFNDISIQQLMISHDMYNTM 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1154 418 Gene3D Transferase(Phosphotransferase) domain 1 197 393 - -
Mibi04g1154 418 Gene3D Phosphorylase Kinase; domain 1 79 196 - -
Mibi04g1154 418 ProSiteProfiles Protein kinase domain profile. 116 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1154 418 FunFam Leucine-rich repeat receptor protein kinase MSP1 80 196 - -
Mibi04g1154 418 ProSitePatterns Tyrosine protein kinases specific active-site signature. 242 254 IPR008266 GO:0004672|GO:0006468
Mibi04g1154 418 Pfam Protein tyrosine and serine/threonine kinase 120 388 IPR001245 GO:0004672|GO:0006468
Mibi04g1154 418 SUPERFAMILY Protein kinase-like (PK-like) 97 388 IPR011009 -
Mibi04g1154 418 FunFam Leucine-rich repeat receptor-like protein kinase 197 395 - -
Mibi04g1154 418 PANTHER LEUCINE RICH REPEAT KINASE 2 39 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1154 Mibi-ChrMibi04 25572273 25573641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1154 30 291 Receptor kinase-like Gene Family AT4G08850 47.407 3.96e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi04g1154 PK_Tyr_Ser-Thr 1.1e-41 CL0016