LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi04g1151	ATGCCATCATCTCTGCTTCTTCTACTCTTCTTCTTCTTCCCCTTTCTTGCTTCTCCTTCAGAGCTTGACACTCTCATGGCCATCAAATCCTCTCTCGACCCACATAACCTTTTTCTGACCTCATGGACTCCCCATTCCAACCCATGTAGTGGCTCTTTTGAGGGCGTGGCATGCAACGAGCATGGCCACGTAGCCAATATTTCTCTCCAAGGTAAGGGTCTCTATGGTAGCCTTCCTGCAGCTGTCGGTGACCTCAAGAGCTTGACGGGTCTCTACCTTCACTTCAATGCTTTGACTGGGACTATTCCCAAGGAGATTGCCAGTTTGAGTGGCCTAAATGATTTGTATCTCAATGTTAATAATCTCTACGGTGATATCCCTCGTGAGATTGGAAATATGTCTAGTCTTCAAGTTTTGCAGCTTTGTTATAACAAATTTACCGGGAGTATACCAACCGAATTTGGAAACCTGGAGAGAATTAGTGTTCTTGCTCTGCAATATAATCAGTTGAGTGGAGCAATTCCTGCTACTTTGGGTCAATTGCAGTCCCTAACGAGGTTGGATCTGAGCTTTAATAACCTTTTTGGTCCTATTCCAGTGAGACTAGCTGACGCACCCAAATTAGAAAGCCTTGATATTCAGAACAATTCTCTCTCGGGCAATGTTCCAGAAGGTCTTAGAAGACTGAGACACGGTTTCCAGTACATCAACAACCCAGGCTTATGTGGGACTGAATTTGCCAATTTAGTTGCTTGTAAATCTTTATTTGACCCTAGTAAGCCTGAACCATTTGAACCCGTTAATATTTCCACAGAAGGTCTTCCAGCATCAGTTAAACCGAAGGATGAGAAGTGCAGTGATGAAAGCAACTGTAGAAAGTCATTGCAATATTCAAGAATGGCTTTAGTTTTTGGAGTGGTTGGAATTATTGTCGCTTCCACAATTTCTGGACTTTCGATTTTTGTGTGGCATCGTCGCCAAAATCAGAAGATCAAAAGCACTATTGATGCTTCTGATAGCCACGTTAGCAGGAAAAAGTCGGCTCCTTTGATCAGTTTAGAATATTCTAATGGTTGGGATCCCATAGCCAAAGGCAGAAGTACTTATTCCCAGGAAATTCTAGAGAGCTTTATGTTCAATCTAGACGAGGTAGAACGAGCTACTCAATGCTTCTCTGAGGTGAATTTGTTGGGGAAGAGTAACATGTCAGAAATTTACAGGGGAATTTTGAGAGATGGTTCTGTTGTGGTTGTAAAGTGCATCAACAAGACAAGCTGCAACTCTAATGAAACTGAATTCTTGAAGGGGTTGAAGATATTGACCTCATTAAAACATGAAAATCTTGTTCGTTTGAGAGGGTTTTGCTGTTCTAAAAGTAGGGGAGAGTGTTTTCTTGTTTATGATTTTGCCCCTAATGGTAATTTGTTGCAGTACTTGGATCTCCAGAAAGGTGATACAAAGATTCTGAAATGGTCTACCAGAGTATCCATCATTTATGGTATTGCTAGAGGTATTGGTTATCTGCATAGAAAGAAGGGAAGAAAACAGGCTCTAATCCACCAGACAATATCAGCTGAAAATGTGCTTCTTGATGCACATTACAATCCATTACTGGCACATTCTGGATTGCACAAACTCCTTGCTGATGATGTTGTCTTCTCTGCCCTTAAAGCTTCTGCTGCAATGGGATACCTTGCTCCAGAATACACCACTACCGGTTGTCTAACTGAGAAGAGCGATATATATGCTTTTGGGGTGATAGTGTTGCAGCTTCTCACCGGAAAGAGTGATATTTCACAGTTGTATTATTATCAGGCACAAGCATTTGGGTATAATGATATAGTTGATGTTAACCTTGAAGGAAGTTTCTCAGAATCAGAGGCAGCTAAACTAGGGAGCATTGCTCTACTGTGCACTCATGAATCACCCCATGAACGACCATCTATGGATCTTGTAATGCAAGAGCTGTCTGAGAAGTGA	1980	0.4182	MPSSLLLLLFFFFPFLASPSELDTLMAIKSSLDPHNLFLTSWTPHSNPCSGSFEGVACNEHGHVANISLQGKGLYGSLPAAVGDLKSLTGLYLHFNALTGTIPKEIASLSGLNDLYLNVNNLYGDIPREIGNMSSLQVLQLCYNKFTGSIPTEFGNLERISVLALQYNQLSGAIPATLGQLQSLTRLDLSFNNLFGPIPVRLADAPKLESLDIQNNSLSGNVPEGLRRLRHGFQYINNPGLCGTEFANLVACKSLFDPSKPEPFEPVNISTEGLPASVKPKDEKCSDESNCRKSLQYSRMALVFGVVGIIVASTISGLSIFVWHRRQNQKIKSTIDASDSHVSRKKSAPLISLEYSNGWDPIAKGRSTYSQEILESFMFNLDEVERATQCFSEVNLLGKSNMSEIYRGILRDGSVVVVKCINKTSCNSNETEFLKGLKILTSLKHENLVRLRGFCCSKSRGECFLVYDFAPNGNLLQYLDLQKGDTKILKWSTRVSIIYGIARGIGYLHRKKGRKQALIHQTISAENVLLDAHYNPLLAHSGLHKLLADDVVFSALKASAAMGYLAPEYTTTGCLTEKSDIYAFGVIVLQLLTGKSDISQLYYYQAQAFGYNDIVDVNLEGSFSESEAAKLGSIALLCTHESPHERPSMDLVMQELSEK	659

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi04g1151	659	CDD	STKc_IRAK	397	658	-	-
	Mibi04g1151	659	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	67	658	-	-
	Mibi04g1151	659	Gene3D	Ribonuclease Inhibitor	133	244	IPR032675	-
	Mibi04g1151	659	SUPERFAMILY	L domain-like	18	230	-	-
	Mibi04g1151	659	Pfam	Protein tyrosine and serine/threonine kinase	395	656	IPR001245	GO:0004672\|GO:0006468
	Mibi04g1151	659	Pfam	Leucine rich repeat	135	194	IPR001611	GO:0005515
	Mibi04g1151	659	Gene3D	Phosphorylase Kinase; domain 1	362	469	-	-
	Mibi04g1151	659	Pfam	Leucine rich repeat N-terminal domain	19	59	IPR013210	-
	Mibi04g1151	659	CDD	TM_EGFR-like	300	332	-	-
	Mibi04g1151	659	Gene3D	Transferase(Phosphotransferase) domain 1	471	659	-	-
	Mibi04g1151	659	FunFam	Protein NSP-INTERACTING KINASE 2	131	253	-	-
	Mibi04g1151	659	ProSiteProfiles	Protein kinase domain profile.	391	659	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi04g1151	659	SUPERFAMILY	Protein kinase-like (PK-like)	368	655	IPR011009	-
	Mibi04g1151	659	Gene3D	Ribonuclease Inhibitor	20	131	IPR032675	-
	Mibi04g1151	659	FunFam	Leucine-rich repeat receptor-like kinase	20	130	-	-
	Mibi04g1151	659	FunFam	Protein NSP-INTERACTING KINASE 2	363	469	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi04g1151	Mibi-ChrMibi04	25494216	25497803	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi04g1151	8	504	Miscellaneous Gene Families	AT4G22730	48.855	3.45e-171	497

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-IV	Mibi04g1151		PK_Tyr_Ser-Thr	8.6e-36	CL0016