Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi04g1141 | ATGGCCTCGAATGTTCACAGAAATGGCGCCCAAAGGGGGGCTGCGAAGCTTGATCATCGGCTTGTTTCGACTGGTGCGAACGTTAAAGCGACGTCGTTTAAACCAAGGGTTCCTCCTTCATCGCAGTCTCACTCTCCGGGATCCGCTCTTCGCCGGAGTAGCCCTGCCTCGTTGGCAGCTAGAAACGGTGATGGAGTACCTGGAAGAGTTCGAGTGGCTGTAAGGCTGAGACCTCGAAATGCTGAAGAAATGGTTGCAGATGCTGATTTTGCTGATTGTGTTGAGTTGCAACCTGAGTTTAAAAGGTTGAAACTTCGGAAAAACAATTGGGATTCAGACACATATGAGTTTGATGAAGTATTTACTGAATTTGCATCACAGAAGCGTGTCTATGAAGTTGTTGCTAAGCCAGTTGTTGAGAGTGTTCTTGATGGATATAATGGGACGGTAATGGCTTATGGCCAAACAGGCACTGGGAAAACTTTTACGGTTGGACAATTGGGGGAAGATGACACTTCCAATCGTGGCATCATGGTTCGTTCTATGGAGGATATTTTAGCAGATCTATCTCCAGAAACTGATTCAATCACTGTCTCATACTTGCAGCTTTACATGGAGACTCTCCAGGACTTGCTTAATCCTGTGAATGATAACATTCCTATTGTGGAGGATCCAAGAACTGGTGATGTATCTTTGCCTGGGGCTACTGTTGTAGAAATTAGAGACCAGCGGAGTTTTTTGGAGCTTCTAAGAGTGGGGGAAGCTCACCGTTTTGCTGCTAACACAAAGTTGAATACTGAATCTTCTCGTAGTCATGCTATTTTAATGGTACAAGTTAAGAGGTCCCTGTTAGAAAGTGAAGATATTTCTGCTCATGAAAACAATGACTCTTCACATTTGACTAAACCTTCTAAACCAATTGTTCGAAAGAGCAAGTTGGTTGTGGTAGATTTGGCCGGCTCAGAGCGTATCCACAAGTCAGGGAGTGAAGGACAAATGCTCGAGGAAGCTAAATCTATAAATCTTTCACTTAGTGCATTGGGAAAATGTATTAATGCTCTTGCAGAAAACAGTGTTCATGTTCCAATTCGGGATTCCAAGCTCACTAGGTTGCTCAGAGATTCTTTTGGAGGTACTGCTAGGACTTCTTTGATTGTAACTATTGGGCCATCTCCACGTCATCGAGGAGAGACTGCAAGTACCATATTGTTTGGTCAGAGGGCGATGAAAGTTGAGAATATGTTGAAAATAAAGGAGGAATTTGATTACAAAAGTTTAGCCCGAAGGTTTGAAATACAAGTAGATAAGCTGATTGCGGAAAATGAAAGGCAACAGAAAGCTTTTGAGGATGAAGTTGAGAAAACAAATTTGGAGGCTCAAAGTCGTATAGCTGAAGTTGAGAGGAATTTCGCAGATGCATTGGAGAAAGAGAGATTGAAATGCCAGTTGGAGTACATGGATTTAGTCAAGCAGTTGGAGCATAAGTTGGTATTGAGCCACGAAAGACGTGACTGCAATGGCTTTGCAGATGTGCACGGAGAGGGGCCTGGGCCATCTTCTGCAAATGAAATTTCTGAGGTCAAAAAAATGCTTGAAAATGAATTTAAAAGAAGAAAGGAAGCTGAAGAAGAGGTGCAAATTTTAAAAATTCAGCTGGGGAAACATTCACAGATAGAGGCTGGGGGCGATGTGGAGATTCTAAATCTTCGCAGAATGCTAGAAGAGGAGGCACATCAGAAAAAGAAACTTGAAGAAGAGATAATAATACTACGAAGTCAGTTATTACAATTGACCTATGAAGCTGATCAGGTGAGGAGGTGTTTTGAAAGTGGTGGCTCTGGAAATGCATTTTCTGTCATGGATTCTGCCATGTCTCAAGCCATGAGTGGTCAACTCAGAGACAATGGAAATGGTCAGAAAGCATCTGTTGCTACTCTATTTGAACAAGTTGGATTGCACAAGATATTGACCTTACTGGAGTCAGATGATGCCAATGTACGGATTCATGCAGTGAAAGTGGTTGCTAACCTGGCAGCTGAAGAGGTAAATCAGAAAAGAATTGTAGATGCAGGTGGTCTCACATCCTTACTTATGCTTCTTAGAAGATATGAGGATGAAACTGTTCGCAGGGTGGCAGCAGGGGCAATAGCCAATCTTGCGATGAATGAAGCCAATCAAGAACTTATTATGGCTGAAGGTGGAATTACTCTCTTATCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTCCGAATGGTAGCTGGAGCTATTGCTAATCTATGTGGAAATGAGAAGTTGTTAATGAAGGTGAGATCTCAAGGTGGTATAAAGGCTTTGCTAGGAATTGTAAGGTGTGGACATCCTGATGTTCTTTCCCAAGTTGCTAGAGGAATTGCCAATTTTGCAAAGTGCGAGTCCCGAGCTTCTACTCAAGGGATAAAAAGTGGCAGATCCTTTTTAGTGGAAGATGGTGTGCTTCCTTGGATAGTGCAAAATGCTAACAGTGAAGCTGCACCAATCAGGCGCCACATTGAGCTTGCAATTTGCCACTTGGCACAGCATGAAGTGAATGCAAAAGACATGGTAAGTGGAGGTGCCCTTTGGGAGCTTGTCCGGATTTCAAGGGATTGTTCACGAGAGGACATACGGAATCTCGCTCGTCGAACTCTAAATAATAGCCCGACATTTAAATCCGAACTGAGACGACTACGAATTGAGTATTGA | 2727 | 0.4305 | MASNVHRNGAQRGAAKLDHRLVSTGANVKATSFKPRVPPSSQSHSPGSALRRSSPASLAARNGDGVPGRVRVAVRLRPRNAEEMVADADFADCVELQPEFKRLKLRKNNWDSDTYEFDEVFTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTVGQLGEDDTSNRGIMVRSMEDILADLSPETDSITVSYLQLYMETLQDLLNPVNDNIPIVEDPRTGDVSLPGATVVEIRDQRSFLELLRVGEAHRFAANTKLNTESSRSHAILMVQVKRSLLESEDISAHENNDSSHLTKPSKPIVRKSKLVVVDLAGSERIHKSGSEGQMLEEAKSINLSLSALGKCINALAENSVHVPIRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLARRFEIQVDKLIAENERQQKAFEDEVEKTNLEAQSRIAEVERNFADALEKERLKCQLEYMDLVKQLEHKLVLSHERRDCNGFADVHGEGPGPSSANEISEVKKMLENEFKRRKEAEEEVQILKIQLGKHSQIEAGGDVEILNLRRMLEEEAHQKKKLEEEIIILRSQLLQLTYEADQVRRCFESGGSGNAFSVMDSAMSQAMSGQLRDNGNGQKASVATLFEQVGLHKILTLLESDDANVRIHAVKVVANLAAEEVNQKRIVDAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNEKLLMKVRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASTQGIKSGRSFLVEDGVLPWIVQNANSEAAPIRRHIELAICHLAQHEVNAKDMVSGGALWELVRISRDCSREDIRNLARRTLNNSPTFKSELRRLRIEY | 908 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi04g1141 | 908 | CDD | KISc | 69 | 409 | - | - | |
| Mibi04g1141 | 908 | PANTHER | CENTROMERE PROTEIN E | 69 | 582 | - | - | |
| Mibi04g1141 | 908 | Pfam | Armadillo/beta-catenin-like repeat | 683 | 720 | IPR000225 | GO:0005515 | |
| Mibi04g1141 | 908 | MobiDBLite | consensus disorder prediction | 25 | 52 | - | - | |
| Mibi04g1141 | 908 | SMART | kinesin_4 | 67 | 419 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Mibi04g1141 | 908 | PRINTS | Kinesin heavy chain signature | 361 | 382 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Mibi04g1141 | 908 | PRINTS | Kinesin heavy chain signature | 145 | 166 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Mibi04g1141 | 908 | PRINTS | Kinesin heavy chain signature | 312 | 330 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Mibi04g1141 | 908 | Coils | Coil | 427 | 476 | - | - | |
| Mibi04g1141 | 908 | Coils | Coil | 524 | 558 | - | - | |
| Mibi04g1141 | 908 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
| Mibi04g1141 | 908 | ProSiteProfiles | Kinesin motor domain profile. | 69 | 411 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Mibi04g1141 | 908 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 691 | 734 | IPR000225 | GO:0005515 | |
| Mibi04g1141 | 908 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 69 | 446 | IPR027417 | - | |
| Mibi04g1141 | 908 | SUPERFAMILY | ARM repeat | 641 | 893 | IPR016024 | - | |
| Mibi04g1141 | 908 | ProSitePatterns | Kinesin motor domain signature. | 311 | 322 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
| Mibi04g1141 | 908 | SMART | arm_5 | 722 | 763 | IPR000225 | GO:0005515 | |
| Mibi04g1141 | 908 | SMART | arm_5 | 680 | 721 | IPR000225 | GO:0005515 | |
| Mibi04g1141 | 908 | SMART | arm_5 | 640 | 679 | IPR000225 | GO:0005515 | |
| Mibi04g1141 | 908 | SMART | arm_5 | 764 | 804 | IPR000225 | GO:0005515 | |
| Mibi04g1141 | 908 | Coils | Coil | 566 | 600 | - | - | |
| Mibi04g1141 | 908 | Gene3D | Kinesin motor domain | 64 | 441 | IPR036961 | - | |
| Mibi04g1141 | 908 | FunFam | Kinesin-like protein | 61 | 441 | - | - | |
| Mibi04g1141 | 908 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 650 | 692 | IPR000225 | GO:0005515 | |
| Mibi04g1141 | 908 | FunFam | Kinesin-like protein | 620 | 896 | - | - | |
| Mibi04g1141 | 908 | Gene3D | - | 624 | 903 | IPR011989 | - | |
| Mibi04g1141 | 908 | Pfam | Kinesin motor domain | 75 | 411 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi04g1141 | Mibi-ChrMibi04 | 25189931 | 25212107 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi04g1141 | 64 | 413 | Calmodulin-binding Proteins | AT5G65930 | 34.605 | 2.56e-45 | 175 |