Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1139 ATGGCGGCGGATGATCAGAGTGTTGGAAAGTCGACGGCGGTCAATTCGTCGTCGGAGAAACGACACCGTTCCATATTCGAACTCCCGCCTGACTTTTTTCACTCCTGTCGCCTCCTTTCTTCTCCTCAATCGTCCCTTCAGAATTGCCATGACTCAGTACGCGAAACCCTTGACCTTATTGTGAACGACCCTAATGAGTCCCAAGACGTCTCTGTTTCAATGCTCAGGTGGACTTGCAATACTTGTAAGGCTCAATTTGAGTCCCTTCAAGACCAGCGTTTGCATTTCAAATCGGATATCCATCGGTTCAATGTGAAGTTGTCAATGGCTGGAAAAAATATTGTTAAGGAAGAAGATTTTGAGCTGTTGACATCTGATTCTATTAGAGACTATGATGTTTCGAGTGAGAATGTTCATAATGGTAATGAAGTGATCGAGAAGTTGATGTCTCTGACACTTGAGCCCAGGAATAATTCTCGCTTGAGAATAGTGCTGCTTGCATCTGGTGGGCACTTTGCAGGTTGTGTGTTTGATGGTGATGAGCTTGTGGCTCACAAGACATTCCACAGATATGTTGTGAGGGCGAAGGCAGGGAAAAAACAGTCATCAAAAGATGCTACTGGTAGAGCCGCCCACTCTGCTGGGGCTTCACTCCGTCGCCACAATGAACTTGCATTAAAGAAGGAAATTCAAGAGCTTCTTACTGATTGGAAAAACTATTTTGATGCTTCCAATTGCATATTTTTACACGCTCCCTCTGGTAGTCGTCAACTGCTCTTTGATGGAGAGAAACCTTATTTTAGCAATCAGCATAACATTATTAGAAACATTCCATTGACTGTTCGAAGGCCTACTTTAAGAGAAGCAAGGCGTGTATATAACCATTTGACTCAAGTATCCTATGAAGCAGAAGAGGATTTGGGGCCAACTCCCATTACTGTAAGGAATACCAACCCATCCATTGACAAAGAGACCATTACCAACTTAGATAGCAGGGATAAAAGTGAGGCTTGTTCGAGTAAACTAGACGATAATGAACTCCTTATTTCAAGTTCGAGTGAGGGTGAAAATGTAAAAGTAGGTAAACCAACTCCTTTACATCAAGCTGCACAATCTGGTGACTCTCACAAGGTTTTGGAGCTTCTGGAACAGTGTATGGATCCTTGCATGAAAGATGAAAGAGGAAGGACCCCTTACATGTTGGCCCATGATAAGGAAGTGAGGAATACTTTCAGAAGGTTCATGGCATCAAACCTTGAAAAATGGGATTGGCATGAGGCAAAAGTACCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCAGCTAAGCAGGTTGAAAAAGATGCCAAGAGAAAAGCTAGAGCTAAAGAATCAAAAAAATTACGTAAAGCAAAAGAAAAAAAGGCCCAGGCTGAAGCTGCTAAGAATGCTTCCAAAACTACAGAAAACGAACTGAATGCTTCAACTTTTGTTCATAGAGGACAATCTCAACCTAACAGCGGGTTGAAATTATCTGAAGAGGAGAAACTGAAAAGAGCTCAGGCTGAAGAAAGGGAGAAGAGAGCAGCTGCTGCAGAGAGAAGATTCTCTGTCCTCAAGATTGAAGGCACCAATGCGACCACCGTCCCAAGCACTTCAGAACCAAAGAGTGGAGCAGCCGGCGACATATATTGTTCTTGTTGTAATATATCGCTGGCTGGTAAAATTCCATTCCATAGGTATAATTATAAATACTGCAGTACTTCATGCATGCATGTACACAGGGAGATCTTAGAGGATGGATGA 1788 0.4279 MAADDQSVGKSTAVNSSSEKRHRSIFELPPDFFHSCRLLSSPQSSLQNCHDSVRETLDLIVNDPNESQDVSVSMLRWTCNTCKAQFESLQDQRLHFKSDIHRFNVKLSMAGKNIVKEEDFELLTSDSIRDYDVSSENVHNGNEVIEKLMSLTLEPRNNSRLRIVLLASGGHFAGCVFDGDELVAHKTFHRYVVRAKAGKKQSSKDATGRAAHSAGASLRRHNELALKKEIQELLTDWKNYFDASNCIFLHAPSGSRQLLFDGEKPYFSNQHNIIRNIPLTVRRPTLREARRVYNHLTQVSYEAEEDLGPTPITVRNTNPSIDKETITNLDSRDKSEACSSKLDDNELLISSSSEGENVKVGKPTPLHQAAQSGDSHKVLELLEQCMDPCMKDERGRTPYMLAHDKEVRNTFRRFMASNLEKWDWHEAKVPSALTKEMEESQAAKQVEKDAKRKARAKESKKLRKAKEKKAQAEAAKNASKTTENELNASTFVHRGQSQPNSGLKLSEEEKLKRAQAEEREKRAAAAERRFSVLKIEGTNATTVPSTSEPKSGAAGDIYCSCCNISLAGKIPFHRYNYKYCSTSCMHVHREILEDG 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1139 595 Coils Coil 448 485 - -
Mibi04g1139 595 Pfam Vms1-associating treble clef domain 558 590 IPR041540 -
Mibi04g1139 595 MobiDBLite consensus disorder prediction 433 515 - -
Mibi04g1139 595 Gene3D - 322 429 IPR036770 -
Mibi04g1139 595 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 142 594 - -
Mibi04g1139 595 SUPERFAMILY Ankyrin repeat 342 414 IPR036770 -
Mibi04g1139 595 MobiDBLite consensus disorder prediction 1 22 - -
Mibi04g1139 595 SUPERFAMILY beta-beta-alpha zinc fingers 67 109 IPR036236 -
Mibi04g1139 595 Coils Coil 504 536 - -
Mibi04g1139 595 MobiDBLite consensus disorder prediction 475 504 - -
Mibi04g1139 595 MobiDBLite consensus disorder prediction 353 373 - -
Mibi04g1139 595 Pfam Bacteroidetes VLRF1 release factor 163 301 IPR041175 -
Mibi04g1139 595 MobiDBLite consensus disorder prediction 440 454 - -
Mibi04g1139 595 ProSitePatterns Zinc finger C2H2 type domain signature. 79 101 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1139 142 466 C2H2 Transcription Factor Family AT1G01930 61.094 6.02e-137 409