Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1138 ATGGCTACTTATTCTTCTCGTTCATGTTACTGGGTCTTGTTCATTATGGTAATGGGTGCTTTTGTTGTGTGCGTTAAATCGAGCCAGATTAGTTTGGGCTCGAGACTAATGGCTAGTAAGGGTGAGGCAGAGGCATGGATTTCAGATAATGGCACATTCGCGTTTGGGTTCACCACTACTTCTGCAGCAACTGACAATAATGATGATAAGTTGTTTCTGCTTGCCATTTGGTTCGCCAAGCTTCCTGGAGAGCGAACTTTGGTCTGGTCGCCTAATAGGGAATCTCCAGCATCCCAAAATGCAATGTTGGAGCTCGACACCACAGGAAACCTGGTTCTCTCCGAGGGACACGTCATCCTCTGGGCCTCAAACACCTCCGGCTCCGGCGTACATTCAGCATCCATGGAAGAATCCGGCAACTTGGTCCTCCACGCCGACCGCCCCGTGTGGCAGAGCTTCTCACAGCCAACCGACACCCTCCTTCCAAACCAACCTTTAACTGTCTCTTTGGAATTGACATCCTCTAAATCTCCTTCTCATGGTGGCTTCTACGCTCTCCAAATGCTTCAACAAGCCACTTCTTTAAGCCTTGGCCTCACTTTTATTCTCCCACATGCAGAACCTTACACTAATTATTCCTATTGGCAAGGCCCGGATACATCCAATGTCACAGGCAATGTTTCAGCGATTCTAGATCAAGCAGGAAGCTTTGGGATTGTGTATGGAGATTCTTCTGATGGAGCTGTTTATGTTTACAAAAATGGGAACGACGACTTGGGGTTGTCTTATTCATCTCACCAAGCGCTCCCACTCAGCACTCTCAGAAGGTTGACTCTGGAAAAGAATGGGAATTTGCGTTTGTATCGTTGGGATGATGATGTGAATGGTTCAAGACAATGGGTTTCTGAGTGGGCTGCAGTATCAAACCCTTGTGATATTGCTGGAATTTGTGGTAATGGGGTTTGTAAATTAGACAGAAGTAAGACAAATGCATCTTGTACTTGCTTCCCTGGGACTTCTCAAGTTGGAAGTGATGGCCTTTGCTATGAGAATTCTTCACTCGTAGGAAAATGCAATCCCCAACATGAAAACAAAAATCAAACTCAAACATCAGAGTTTATGATTTCTGTGGTGCAACAGACGAATTACTATTTTTCTGAAACTTCTGTGGTCGCAAACTATAGTGATGTTGCTACTGTTTCAAAATGCGGGGATGCTTGCTTATCAGATTGTGATTGTGTTGCTTCAGTTTATGGGCTAAATGAAGAAGCACCGTATTGTTGGGTATTAAGAAGCTTGGATTTTGGTGGGTTTGAGGATACTAGCGCGACACTTTTTGTGAAGTTGAGGTCAAATGGTTCTACGACACCAGAAGGTAAAGCAGGAGTGTCTAGCAATAATTCTGATGGTGAGGTTAAAGAGAAGGTTGTGGTCATTCCAATTGTTCTTAGCATGGCACTTCTTATTGCCCTGCTATGTTTACTGTTATACTATAGTGTTCATCGAAAAAGAACATTGAAAAGGGAGATGGAAAGTTCATTGATCTTATCAGGTGCTCCTGTGAAATTCTCATACCATGATTTGCAAATCAGGACCTGTAACTTCTCGCTGTTGCTGGGAACAGGTGGATTTGGAAGTGTGTACAAAGGAGGTCTTAGAGATGAGACACAAGTGGCGGTGAAGAAACTTGATAGGGTTTTGCCTCATGGAGAGAAGGAATTTATCACTGAAGTAAGCACCATTGGCTCAATGCACCACATGAACTTAGTTCGCTTATATGGCTTTTGCTCGGAGGGATCACATCGGCTTCTAGTTTATGAGTTCATGAAAAATGGGTCTTTGGACAAATGGATCTTCCCTTCGTGTAAAGGACGAGATAGGCTGTTGGATTGGCAAACTCGGTTTGATATAGCGATTGGTACTGCACAAGGGATTGCATACTTTCATGAGCAGTGCAGGAACCGAATAATACATTGTGACATAAAACCAGAAAATATTCTGCTTGATGAGAATTTTTGTCCCAAAGTGTCTGATTTTGGATTGGCAAAACTGATGGCAAGGGAGCACTCCCAGGTGGTAACAATGGTAAGAGGGACTAGAGGCTATTTGGCACCGGAGTGGGTTAGCAATCGCCCAATAACTGTAAAAGCCGATGTCTATAGTTATGGGATGCTCCTATTAGAGATCATTGGTGGCCGCAGAAATCTTGACATGTCCTATGGTACAGAGGACTTCTTCTATCCTGGTTGGGCTTTTAAGGAGCTGACAAATGGGATAGCAATCAAAGCAGCAGATAGGAGACTAAATGGGGCAGTGGATGAAGAGGAGCTGATAAGAGCCTTGAGGGTTGCATTTTGGTGCATTCAAGATGAGGTTTTCTTGAGACCAACAATGGGAGAAGTTGTGAGGATGTTGGAAGGGTCTATCAGTGTCAACACACCACCAATGCCACAAACAGTAATAGAGTTGATTGAGGAAGGCTTAGAGCAAGTGTATAGAGCGATGAAGAGAGAGTATAATCCTTATAGCTCATTCACATTGACTAGCCATCCTTCTTCTCTTGCTACTTGTAGCAATTCCACAATGTCACCAAGATAG 2598 0.4392 MATYSSRSCYWVLFIMVMGAFVVCVKSSQISLGSRLMASKGEAEAWISDNGTFAFGFTTTSAATDNNDDKLFLLAIWFAKLPGERTLVWSPNRESPASQNAMLELDTTGNLVLSEGHVILWASNTSGSGVHSASMEESGNLVLHADRPVWQSFSQPTDTLLPNQPLTVSLELTSSKSPSHGGFYALQMLQQATSLSLGLTFILPHAEPYTNYSYWQGPDTSNVTGNVSAILDQAGSFGIVYGDSSDGAVYVYKNGNDDLGLSYSSHQALPLSTLRRLTLEKNGNLRLYRWDDDVNGSRQWVSEWAAVSNPCDIAGICGNGVCKLDRSKTNASCTCFPGTSQVGSDGLCYENSSLVGKCNPQHENKNQTQTSEFMISVVQQTNYYFSETSVVANYSDVATVSKCGDACLSDCDCVASVYGLNEEAPYCWVLRSLDFGGFEDTSATLFVKLRSNGSTTPEGKAGVSSNNSDGEVKEKVVVIPIVLSMALLIALLCLLLYYSVHRKRTLKREMESSLILSGAPVKFSYHDLQIRTCNFSLLLGTGGFGSVYKGGLRDETQVAVKKLDRVLPHGEKEFITEVSTIGSMHHMNLVRLYGFCSEGSHRLLVYEFMKNGSLDKWIFPSCKGRDRLLDWQTRFDIAIGTAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMAREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSYGTEDFFYPGWAFKELTNGIAIKAADRRLNGAVDEEELIRALRVAFWCIQDEVFLRPTMGEVVRMLEGSISVNTPPMPQTVIELIEEGLEQVYRAMKREYNPYSSFTLTSHPSSLATCSNSTMSPR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1138 865 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 609 815 - -
Mibi04g1138 865 FunFam S-receptor-like serine/threonine-protein kinase 502 608 - -
Mibi04g1138 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Mibi04g1138 865 CDD STKc_IRAK 539 807 - -
Mibi04g1138 865 Pfam Protein kinase domain 538 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1138 865 ProSitePatterns Protein kinases ATP-binding region signature. 539 562 IPR017441 GO:0005524
Mibi04g1138 865 CDD B_lectin 48 156 IPR001480 -
Mibi04g1138 865 SUPERFAMILY Protein kinase-like (PK-like) 512 806 IPR011009 -
Mibi04g1138 865 Pfam S-locus glycoprotein domain 255 338 IPR000858 GO:0048544
Mibi04g1138 865 Gene3D Transferase(Phosphotransferase) domain 1 609 822 - -
Mibi04g1138 865 Gene3D Phosphorylase Kinase; domain 1 497 608 - -
Mibi04g1138 865 SMART blect_4 37 156 IPR001480 -
Mibi04g1138 865 PIRSF SRK 1 854 IPR024171 GO:0004674
Mibi04g1138 865 ProSiteProfiles Bulb-type lectin domain profile. 38 156 IPR001480 -
Mibi04g1138 865 Pfam D-mannose binding lectin 86 170 IPR001480 -
Mibi04g1138 865 ProSiteProfiles Protein kinase domain profile. 533 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1138 865 Gene3D - 25 155 IPR036426 -
Mibi04g1138 865 PANTHER OS07G0415500 PROTEIN 7 817 - -
Mibi04g1138 865 SMART serkin_6 533 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1138 865 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 292 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1138 Mibi-ChrMibi04 25083797 25088030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1138 483 815 Receptor kinase-like Gene Family AT5G20050 42.424 6.51e-84 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi04g1138 Pkinase 7e-47 CL0016