Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1133 ATGGCTAAGCGTGTGTCCCTCACGCGTTCACCTTCCTTACCTTCTCAACCATCTCCAACTAAAATGGCTTCTCTTGCTTCCTCTTCTCCTTTCATTGTCCCCTCTCGCACTACACATTCCTTCTCACTCCCTTCTTCTTCTTATTCTTATTCTCTCTCTTCCCTCAAATGCTTAACATCTTCTCCTCCCATTTCTCATCTCTTTTTCAATCAGGCTCGGCGAAGAGCACAGGTTTGTTTATCTAATGGAGGATATAGCACTGTGTCTGCTCCCAAGTCATTTGCGTCTAATCCTGATCAATTGAGGAGTGCAAGAGAAGACATCAGACAGCTTCTCAAATCTAAGTTCTGCCATCCAATTCTGATTCGCTTGGGATGGCATGATGCTGGTACTTACAATAAAAGTATTGAGGAGTGGCCACAAAGAGGTGGAGCTAACGGGAGCTTAAGATTTGAAGTTGAACTGAAACATGCAGCCAATGCTGGGCTTATTAATGCATTGAAACTTCTCCAGCCTATCAAAGACAAGTACCCTGGTCTGACATATGCAGATTTGTTTCAGCTAGCTGCTGCTACTGCTGTGGAGGAGGTTGGTGGACCAAAAATACCTATGAGGTATGGAAGACTTGATGTATCAGGACCTGAACAGTGTCCTGAAGAAGGAAGACTTCCTGATGCTGGCCCCCCTTCACCTGCTGATCATTTACGGCAAGTTTTTTACAGAATGGGTTTAAATGACAGGGAAATAGTTGCACTATCTGGTGCTCACACACTGGGGCGGGCTCGACCAGAACGTAGTGGCTGGGGGAAGCCGGAGACCAAGTACACAAAAGATGGATCAGGAGAACCTGGGGGGCAATCCTGGACGGTGCAATGGTTAAAGTTTGACAATTCTTACTTCAAGGACATCAAAGAAAGAAAGGATGAAGAACTACTGGTCTTGCCGACTGATGCTGTTCTTTTTGAGGATTCTTCTTTTAAGGTCTATGCCGAGAAATATGCTGAAGATCAGGAAGCGTTCTTTAAAGATTATGCTGAAGCCCATGCCAAACTTAGCAATCTTGGAGCCATATTTGATCCTCCAGAGGGTATTGTCATAGATGGCGGATCTCCAAAACCTGAGCCAGAGAAGTTTGAAGCAGCTAAATATTCGACTGGAAAGAGAGAGCTGTCGGATGCTATGAAACAGAAGATTCGGGCCGAGTATGAGGGATTTGGCGGGAGCCCAGATAAGCCTCTACAGTCTAACTATTTTCTAAATATCATAATTATCATTGCCGTTTTGGCACTTTTGACCTCGCTACTTGGAAACTAG 1314 0.449 MAKRVSLTRSPSLPSQPSPTKMASLASSSPFIVPSRTTHSFSLPSSSYSYSLSSLKCLTSSPPISHLFFNQARRRAQVCLSNGGYSTVSAPKSFASNPDQLRSAREDIRQLLKSKFCHPILIRLGWHDAGTYNKSIEEWPQRGGANGSLRFEVELKHAANAGLINALKLLQPIKDKYPGLTYADLFQLAAATAVEEVGGPKIPMRYGRLDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDREIVALSGAHTLGRARPERSGWGKPETKYTKDGSGEPGGQSWTVQWLKFDNSYFKDIKERKDEELLVLPTDAVLFEDSSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAIFDPPEGIVIDGGSPKPEPEKFEAAKYSTGKRELSDAMKQKIRAEYEGFGGSPDKPLQSNYFLNIIIIIAVLALLTSLLGN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1133 437 Pfam Peroxidase 105 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 PRINTS Haem peroxidase superfamily signature 288 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 PRINTS Haem peroxidase superfamily signature 180 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 PRINTS Haem peroxidase superfamily signature 198 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 PRINTS Haem peroxidase superfamily signature 118 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 SUPERFAMILY Heme-dependent peroxidases 97 364 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 MobiDBLite consensus disorder prediction 1 23 - -
Mibi04g1133 437 ProSiteProfiles Plant heme peroxidase family profile. 183 379 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 CDD ascorbate_peroxidase 89 359 - -
Mibi04g1133 437 PRINTS Plant ascorbate peroxidase signature 97 117 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 PRINTS Plant ascorbate peroxidase signature 179 197 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 PRINTS Plant ascorbate peroxidase signature 198 210 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 PRINTS Plant ascorbate peroxidase signature 317 341 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 PRINTS Plant ascorbate peroxidase signature 118 133 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi04g1133 437 FunFam L-ascorbate peroxidase T, chloroplastic 226 349 - -
Mibi04g1133 437 MobiDBLite consensus disorder prediction 260 284 - -
Mibi04g1133 437 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 85 356 IPR044831 GO:0004601|GO:0034599
Mibi04g1133 437 MobiDBLite consensus disorder prediction 8 23 - -
Mibi04g1133 437 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 104 228 - -
Mibi04g1133 437 ProSitePatterns Peroxidases proximal heme-ligand signature. 248 258 IPR019793 -
Mibi04g1133 437 MobiDBLite consensus disorder prediction 263 277 - -
Mibi04g1133 437 Gene3D Peroxidase, domain 2 226 349 - -
Mibi04g1133 437 Gene3D - 104 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1133 Mibi-ChrMibi04 24612722 24617547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1133 104 354 Peroxidase AT5G66390 27.797 2.60e-17 80.9