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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Mibi04g1119
ATGAAGTGTATAGAGAACGCAACAAGCAGGCAAGTGACATTCTCAAAGAGACGTAATGGACTCTTAAAGAAGGCTTTTGACCTTTCAGTTCTGTGTGATGCTGAGGTTGCTCTCATTATTTTCTCTCCCAGAGGCAAGCTCTATGAATATGCAAGCTCCAGCATGCAGGCAACAATTGAACGTTACCGCAATCATAGCAGAGATGCTCGAACAGCAACCGTATTTGTAGAACAAAATATGCAGCAACAAACTCTACATTAA
261
0.4176
MKCIENATSRQVTFSKRRNGLLKKAFDLSVLCDAEVALIIFSPRGKLYEYASSSMQATIERYRNHSRDARTATVFVEQNMQQQTLH
86
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Mibi04g1119
86
PRINTS
MADS domain signature
31
52
IPR002100
GO:0003677|GO:0046983
Mibi04g1119
86
PRINTS
MADS domain signature
16
31
IPR002100
GO:0003677|GO:0046983
Mibi04g1119
86
ProSiteProfiles
MADS-box domain profile.
1
54
IPR002100
GO:0003677|GO:0046983
Mibi04g1119
86
Gene3D
-
6
84
IPR036879
GO:0003677|GO:0046983
Mibi04g1119
86
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
4
50
IPR002100
GO:0003677|GO:0046983
Mibi04g1119
86
FunFam
MADS-box transcription factor 1
6
77
-
-
Mibi04g1119
86
PANTHER
SERUM RESPONSE FACTOR HOMOLOG
1
81
-
-
Mibi04g1119
86
SMART
madsneu2
1
53
IPR002100
GO:0003677|GO:0046983
Mibi04g1119
86
CDD
MADS_MEF2_like
1
71
IPR033896
GO:0000977|GO:0045944
Mibi04g1119
86
SUPERFAMILY
SRF-like
1
72
IPR036879
GO:0003677|GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Mibi04g1119
Mibi-ChrMibi04
23948601
23956481
Proximal
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Mibi04g1119
1
81
MADS-box Gene Family
AT2G45660
74.074
5.05e-40
127
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-M-type
Mibi04g1119
SRF-TF
3.9e-26
No_clan
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Mibi04g1119
04
23948601
23956481
Mibi04g1119
04
23948601
23956481
ECH
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