Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1107 ATGGGTCAAATAGAGACAGCAGCTGGGTTCTTTGAAGCTTCAAGCAAATTTCGCCTTTGATACCATAGTAATCCTACTGCTCCTCCTTATCCACCTCCAACTTCAGATCCAATGGCATCTCCTCCACCACCACCACCACCACCACCAGAGTATAGCCACCCGCCTCCGCCGCCAGATTATAGCCATACGAGTCCACCATCTGAATTTAATTATCCCCCTCCACCTCCTCACCCTTATCCTTATCCTTATCCTTACCCCACTCCTTCAGGGGTTCATAACACCCCTCATAGTTCTCAGTATGGATCATCTCATTATCCATATTCACGTGCGAATAGCTTCTCTGGTTCCTCCCAGCATGAGGGAATGAGCTCTGCTGGGGATGTGTCACCGCAAACTAGTCATAGTTTCAGTCCTTCTCGGATTTTTGGGTATGCACCGTTGGATGATCTTATGGGCAAACTAAGAGAGGCATTGTACGGTTATTCTAATAACTCCTCTGGATGGGGATCTCCCCATTCTGGTTGGATCGATTCATCTAATCTTTCTTATTCGAGCTCATTTAATGATTCAGTCCCTAGTCAGAGTTTCCAGATTGTTCCATCACAAAATAAAGGATCATTGAATGTTTTGCTCCTACATGGGAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCAAATATGGACTTGTTCCACAAAACTTTAGGGGATATGTTTGGTAAGGGAACCATGAGTAAGATTATTACTAGTGATCCTTATGTAACAATTTCAGTTTCCAATGCTGTAATTGCAAGGACTTTTGTGATTAGCAACAGTCAGAATCCTGTTTGGACTCAACATTTTCATGTTCCTGTTGCACATAATGCTGCTGAAGTGCACTTTGTTGTTAAAGATAGTGACGTAGTAGGTTCACAGCTCATTGGCATTGTATCAATTCCTGTAGAACAAATATACTCCGGGGGAAAAATAGAAGGGACCTATCCTGTGCTGAAAAGTAATGGGAAGCCTTGTAAGCCAGGTGCTGTCTTGAGAATATCCATTCAGTACATCCCAATTGAGCGACTGAGCATTTATCACCTTGGAGTTGGAGCAGGACCAGAATACGCTGGAGTTCCTGGCACTTATTTTCCTTTAAGGAAAGGTGGAACTGTTACTCTTTATCAAGATGCTCATGTTCCAGATGGCTGCCTCCCTAATGTGATACTGGACCAAGGGATGCATTATGCACATGGAAAATGTTGGCATGACATCTTCGATGCCATTCGTCAAGCTCGGCGTTTGATTTATATTACAGGGTGGTCGGTTTGGCACAGACTTCAGTTGGTAAGGGATGTTGGTAATCCATCAGGTTCCACGCTGGGTGAACTTCTAAGGTCCAAGTCACAGGAAGGAGTCAGAGTGCTTCTCCTTATTTGGGATGATCCTACATCAAGGAAGATTTTAGGTTATTATACAGATGGTGTCATGGCAACTCATGATGAAGAAACTCGACGATTTTTCAAACACTCTTCTGTTCAAGTGCTGCTTTGTCCCCGCTTTGTAGGAAAACGAAATAGCTGGGTGAGGCAAATGGTTAGCTTTATTGTTTACTTTGCTTATTGA 1605 0.4324 MGQIETAAGFFEASSKFRLXYHSNPTAPPYPPPTSDPMASPPPPPPPPPEYSHPPPPPDYSHTSPPSEFNYPPPPPHPYPYPYPYPTPSGVHNTPHSSQYGSSHYPYSRANSFSGSSQHEGMSSAGDVSPQTSHSFSPSRIFGYAPLDDLMGKLREALYGYSNNSSGWGSPHSGWIDSSNLSYSSSFNDSVPSQSFQIVPSQNKGSLNVLLLHGNLDIWVHEAKNLPNMDLFHKTLGDMFGKGTMSKIITSDPYVTISVSNAVIARTFVISNSQNPVWTQHFHVPVAHNAAEVHFVVKDSDVVGSQLIGIVSIPVEQIYSGGKIEGTYPVLKSNGKPCKPGAVLRISIQYIPIERLSIYHLGVGAGPEYAGVPGTYFPLRKGGTVTLYQDAHVPDGCLPNVILDQGMHYAHGKCWHDIFDAIRQARRLIYITGWSVWHRLQLVRDVGNPSGSTLGELLRSKSQEGVRVLLLIWDDPTSRKILGYYTDGVMATHDEETRRFFKHSSVQVLLCPRFVGKRNSWVRQMVSFIVYFAY 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1107 534 SUPERFAMILY Phospholipase D/nuclease 376 519 - -
Mibi04g1107 534 SMART C2_3c 215 327 IPR000008 -
Mibi04g1107 534 Pfam C2 domain 214 330 IPR000008 -
Mibi04g1107 534 MobiDBLite consensus disorder prediction 90 134 - -
Mibi04g1107 534 MobiDBLite consensus disorder prediction 25 89 - -
Mibi04g1107 534 ProSiteProfiles C2 domain profile. 192 328 IPR000008 -
Mibi04g1107 534 PANTHER PHOSPHOLIPASE D 204 525 IPR015679 -
Mibi04g1107 534 CDD C2_plant_PLD 209 351 - -
Mibi04g1107 534 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 212 353 IPR035892 -
Mibi04g1107 534 MobiDBLite consensus disorder prediction 1 134 - -
Mibi04g1107 534 Gene3D C2 domain 209 339 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1107 Mibi-ChrMibi04 23636308 23638918 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1107 57 531 Phospholipase D Gene Family (Wang group) AT2G42010 58.380 0.0 564