Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1105 ATGATTTACGTTCATTCAAAAGGCATGATAGTTGATGATGAGTATGTGATATTGGGATCTGCAAACATCAATCAGCGGTCTATGGAAGGAACTAGGGACAGTGAAATTGCAATGGGAGCTTACCAACCTCATTATACCTGGGCAAGAAGACATTCCTATCCACGTGGACAGATCCATGGATATAGAATGTCTCTCTGGGCAGAACACACAGCAACAATTGAAGACTGCTTTTTGCAACCGGAGAGCCTCGAATGTGTAAGAAGAGTAAAAGCAATGGGTGAAATGAACTGGAAACTATTTGCGGCACCTGAAGTAACAGAGATGAAAGGGCACCTACTGAAATACCCAGTAGAAGTTGATCGAAAAGGGAAGGTTAGATCCCTCCCTGGCCATGAAAATTTCCCTGATGTTGGAGGCAAAATAACAGGGGAATTTCTTGCCATTGAGAAGAATCTTACCACTTAA 465 0.4258 MIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWARRHSYPRGQIHGYRMSLWAEHTATIEDCFLQPESLECVRRVKAMGEMNWKLFAAPEVTEMKGHLLKYPVEVDRKGKVRSLPGHENFPDVGGKITGEFLAIEKNLTT 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1105 154 SUPERFAMILY Phospholipase D/nuclease 2 86 - -
Mibi04g1105 154 Pfam Phospholipase D C terminal 74 144 IPR024632 -
Mibi04g1105 154 Gene3D Endonuclease Chain A 1 57 - -
Mibi04g1105 154 PANTHER PHOSPHOLIPASE D 1 146 IPR015679 -
Mibi04g1105 154 SMART pld_4 1 27 IPR001736 GO:0003824
Mibi04g1105 154 Pfam Phospholipase D Active site motif 1 27 IPR001736 GO:0003824
Mibi04g1105 154 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1 27 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1105 Mibi-ChrMibi04 23610618 23612067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1105 1 153 Phospholipase D Gene Family (Wang group) AT2G42010 78.431 1.48e-85 269