Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1071 ATGAGTTTTGGGGGTTTTCTCGACAACAACTGGGGCGGCGGCGGAGCCAGAATCGTCGCAGATATTCCGTACAGCAACGGCGGCAGCAACGAGAACAGAATGGCAACGAGTCTAGTGACAGCACCCACCATGGCCAAATCCATGTTCAACTCTCCTGGCCTTTCTCTAGCACTTCAAACGAATCTTGAGGAACAACAAGGAGGAGGAGGGGATGTGAATAATAATAGGTACGAAGCAAATAATAATGTTGGATTAAGAAGAAGCAGAGAAGAAGAACACGAAAGCAGATCTGGTAGTGATAACATGGAAGGTCCCACTTCCGGTGACGATCTTGATGCCACCGACATACCTCCCAGGAAAAAACGTTATCACCGGCATACCCCTCAGCAAATTCAAGAGCTCGAAGCTCTCTTCAAGGAGTGCCCACACCCAGATGAGAAGCAAAGATTAGAACTCAGCAGAAGGCTTTGCTTAGAAACCAGACAAGTTAAATTCTGGTTCCAAAATCGAAGAACCCAGATGAAGACCCAGTTGGAGCGGCATGAGAACACTTTGCTGAGGCAAGAGAATGATAAACTAAGAGCAGAAAACATGTCTATAAGAGAAGCTGTGAGGAATCCAATATGTTCAAATTGTGGAGGGCCAGCGATAATAGGAGAGATTTCTTTAGAAGAACAACACTTAAGGATGGAAAACGCTCGATTAAAAGACGAATTAGACCGGGTTTGTGCTCTCGCCGGAAAGTTTCTGGGCCGGCCGGTCTCTTCGTTAACCGGCCCAATGGTGGGCCCACCTTTGCCCAACTCAAGCTTGGAATTAGGAGTTGGAATTAACAATGGCTTTGTTGCCGGCGGCGGCAGCTTGAATACTGTCTCTCATTCCACATTGCCTCTGGGGCCTTCGGATTTCGGGATTTCCGGCCAATTAGCCATGGTCCCACCGACCGCGACGGCGACATCGGCGATGACAACGATGACTAGGCCGTCGGGTGCTTTTGTGGGAGGCGGGATTGATAATAGGTCTATGTTTTTGGAGCTGGCTTTGGCGGCTATGGATGAGCTTGTGAAGATGGTTCATACTGATGAACCACTTTGGTTAAGAAGCTTAGAAGAAGGAGGAAAGGAGATTTTGAATCATGAAGAGTATATGAGAACATTTACTTCTCCTTGCATTGGTATGAGACCAAATGGTTTTGTTTCAGAAGCTTCTAGAGAAACTGGAATGGTCATCGTTAACAGCTTGGCCCTCGTTGAGACCCTCATGGATTCAAATCGATGGGCAGAAATGTTTCCTTGTTTGATTGCCAGAACTTCCACCACCGATGTAATCTCCAGTGGAATCAATGGAACCAGAAATGGTGCACTCCAACTGATGCATGCGGAGCTTCAGGTGCTTTCACCATTGGTGCCAGTTAGGGAGGTGAATTTTCTACGTTTCTGTAAGCAACACGCAGAAGGAGTGTGGGCAGTGGTGGATGTATCTATTGACAGTGTAATTAGAGAAGCTTCTTCGGGATCCTTCATGAACTCTTCTTGTTGTAGAAGGCTACCTTCTGGTTGCGTTGTTCAAGATATGCCAAATGGTTACTCCAAGGTTACATGGGTGGAACATGCAGAATACGAAGAAAGCCAAGTCCACCAACTCTATAGACCCTTATTAAGCTCCGGCATGGGCTTCGGCGCTCAACGGTGGATCGCCACCTTACAACGCCAATGCGAATGCCTCGCGATCTTAATGTCCTCTTCCGTCCCGTCCCGAGATCACACCGCCGCCATAACGGCCGGTGGCCGGCGGAGCATGTTGAAGCTAGCCCAACGGATGACTAACAATTTCTGTGCCGGAGTTTGTGCCTCCACCGTGCACAAATGGAACAAGCTGAACGCCGGCAATGTCGACGAGGACGTCCGGGTGATGACGCGGAAGAGCGTCGACGATCCCGGCGAGCCGCCGGGGATTGTGTTGAGCGCAGCCACTTCAGTTTGGCTTCCGGTGTCACCACAAAGACTGTTTGATTTCCTACGTAATGAGCGTCTTCGTAGTGAATGGGATATACTATCAAATGGTGGGCCCATGCAAGAGATGGCCCACATTGCTAAAGGCCAAGACCATGGCAATTGCGTCTCTCTCCTACGAGCCAGTGCGATGAATGCAAATCAGAGTAGTATGCTGATACTACAGGAGACATGCATAGACGCGGCGGGGTCGCTTGTAGTGTACGCGCCGGTGGATATTCCGGCGATGCATGTGGTGATGAACGGCGGAGACTCAGCTTACGTGGCGTTATTACCGTCCGGGTTTGCCATAGTTCCTGACGGACCGGGGTCGCGTGGGTCTCAAACGCCGGCGAGTAACGGTAACGTTAGCACTAACGGTGATGGTGTGAATGAGAGAGTAAGTGGGTCCCTCTTAACGGTGGCATTTCAAATCCTCGTGAATAGCCTCCCGACGGCGAAACTAACGGTGGAATCAGTGGAGACGGTGAACAACCTTATCTCGTGTACCGTTCAGAAAATTAAGGCCGCTCTTCATTGTGAAAGCTGA 2541 0.4967 MSFGGFLDNNWGGGGARIVADIPYSNGGSNENRMATSLVTAPTMAKSMFNSPGLSLALQTNLEEQQGGGGDVNNNRYEANNNVGLRRSREEEHESRSGSDNMEGPTSGDDLDATDIPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIREAVRNPICSNCGGPAIIGEISLEEQHLRMENARLKDELDRVCALAGKFLGRPVSSLTGPMVGPPLPNSSLELGVGINNGFVAGGGSLNTVSHSTLPLGPSDFGISGQLAMVPPTATATSAMTTMTRPSGAFVGGGIDNRSMFLELALAAMDELVKMVHTDEPLWLRSLEEGGKEILNHEEYMRTFTSPCIGMRPNGFVSEASRETGMVIVNSLALVETLMDSNRWAEMFPCLIARTSTTDVISSGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSVIREASSGSFMNSSCCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSSGMGFGAQRWIATLQRQCECLAILMSSSVPSRDHTAAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRNERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGSQTPASNGNVSTNGDGVNERVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1071 846 FunFam Homeobox-leucine zipper protein GLABRA 2 345 573 - -
Mibi04g1071 846 SUPERFAMILY Bet v1-like 340 574 - -
Mibi04g1071 846 CDD homeodomain 119 177 IPR001356 GO:0003677
Mibi04g1071 846 MobiDBLite consensus disorder prediction 772 793 - -
Mibi04g1071 846 MobiDBLite consensus disorder prediction 64 127 - -
Mibi04g1071 846 ProSiteProfiles 'Homeobox' domain profile. 117 177 IPR001356 GO:0003677
Mibi04g1071 846 SMART START_1 345 574 IPR002913 GO:0008289
Mibi04g1071 846 Coils Coil 171 203 - -
Mibi04g1071 846 MobiDBLite consensus disorder prediction 83 99 - -
Mibi04g1071 846 MobiDBLite consensus disorder prediction 64 82 - -
Mibi04g1071 846 Gene3D - 109 193 - -
Mibi04g1071 846 SMART HOX_1 118 181 IPR001356 GO:0003677
Mibi04g1071 846 CDD START_ArGLABRA2_like 340 573 - -
Mibi04g1071 846 Pfam Homeodomain 120 175 IPR001356 GO:0003677
Mibi04g1071 846 Pfam START domain 345 574 IPR002913 GO:0008289
Mibi04g1071 846 ProSiteProfiles START domain profile. 336 577 IPR002913 GO:0008289
Mibi04g1071 846 SUPERFAMILY Homeodomain-like 104 177 IPR009057 -
Mibi04g1071 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 119 843 IPR042160 -
Mibi04g1071 846 ProSitePatterns 'Homeobox' domain signature. 152 175 IPR017970 GO:0000981|GO:0006355
Mibi04g1071 846 SUPERFAMILY Bet v1-like 603 839 - -
Mibi04g1071 846 MobiDBLite consensus disorder prediction 776 793 - -
Mibi04g1071 846 FunFam Homeobox-leucine zipper protein HDG1 107 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1071 Mibi-ChrMibi04 22005175 22011341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1071 1 846 Homeobox Transcription Factor Family AT3G61150 66.078 0.0 1064
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi04g1071 START 9e-54 CL0209