Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1055 ATGAGTCGTGCTGCCACTCACATGGCTGATTGGAAATTCACTTTTGCCTTAATTGACTCTATATTGGTGACAGAATTTAAGTCTTCGGATTCTGCTTCAATTGACATAAAGGCTTTACAAAAAGTTCCATCACCTAGTGCAACGTCATTGTCATCTGATTGTGTACAAACCTTGGATGAATACGAGATTGCAAATCATGTAAATGCTGGAAGAAGCAACTCGGTTCGTGTTGTTCATTTTCCATTTGCAGATTTGCGAGCTGCTACTGGTAATTTTTCATCTAGTCGCCTTCTTGGTGAAGGATCCATTGGATGTGTTTACCGGGCTAAATATGCTGATGGAAAGGTTTTAGCTGTGAAAAAACTAAGCTCTACCAATTTCCATGGCAGCTCTCCAGAAGAATTCTCTCAGATTATATCAAAAATTTCCCATGTTCACCACCCAAATATTGCTGAGCTTGTTGGTTATTCTTCAGAGCAAGGAGACAGCATGTTAGTATATGAGTATTTCCGAAATGGCTCTCTTCATGAATTCTTACACATGTCAGACGACTTCAGCAAGCCACTTACATGGAACACTAGAGTCAAAATCGCACTAGGCACAGCTCGAGCAGTTGAGTACCTGCATGAAATCTGTTCTCCATCTTTAGTTCACAAGAACATCAAGTCTTCCAATATTCTGCTCGACAATGAACTCAATCCTCATCTCTCAGACTATGGTTTCGCATCCTTCCATCAGCGCACTAGCCATAATCTTGGGGCAGGATATAATGCACCTGAGTGTTCAATACCTGACGCTTATACCCTGAAGAGTGATGTGTATAGTTTTGGGGTAGTCATGCTGGAGCTGTTAACAGGTCGAAAAGCTTTGGACAGGTCTAAGCCAAAATCAGAAGAATGTCTTGTTCGTTGGGCCACCCCTCAGCTTCACGATATTGATGCATTGTCAAAAATGGTGGATCCTTCCTTGCGAGGACTTTACCCTCCTAAATCACTCTCAAGGCTTGCTGACATAATTGCTCTTTGTGTTCAGCCTGGGCCGGAATTTCGACCGCCAATGTCGGAAGTGGTTCAGTCATTGGTTAGTCTAGTTCAGCATTCAAATGTGAACATGAGAGAATATATGGATGACTGGGATGAATGA 1143 0.4226 MSRAATHMADWKFTFALIDSILVTEFKSSDSASIDIKALQKVPSPSATSLSSDCVQTLDEYEIANHVNAGRSNSVRVVHFPFADLRAATGNFSSSRLLGEGSIGCVYRAKYADGKVLAVKKLSSTNFHGSSPEEFSQIISKISHVHHPNIAELVGYSSEQGDSMLVYEYFRNGSLHEFLHMSDDFSKPLTWNTRVKIALGTARAVEYLHEICSPSLVHKNIKSSNILLDNELNPHLSDYGFASFHQRTSHNLGAGYNAPECSIPDAYTLKSDVYSFGVVMLELLTGRKALDRSKPKSEECLVRWATPQLHDIDALSKMVDPSLRGLYPPKSLSRLADIIALCVQPGPEFRPPMSEVVQSLVSLVQHSNVNMREYMDDWDE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1055 380 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 58 169 - -
Mibi04g1055 380 PANTHER OS01G0253100 PROTEIN 55 368 IPR045271 -
Mibi04g1055 380 Gene3D Phosphorylase Kinase; domain 1 52 169 - -
Mibi04g1055 380 SUPERFAMILY Protein kinase-like (PK-like) 74 360 IPR011009 -
Mibi04g1055 380 Gene3D Transferase(Phosphotransferase) domain 1 170 379 - -
Mibi04g1055 380 Pfam Protein tyrosine and serine/threonine kinase 95 360 IPR001245 GO:0004672|GO:0006468
Mibi04g1055 380 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1055 380 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 170 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1055 Mibi-ChrMibi04 21683254 21686433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1055 27 379 Strubbelig Receptor Gene Family AT1G78980 63.435 4.25e-156 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mibi04g1055 PK_Tyr_Ser-Thr 1.6e-39 CL0016