Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1047 ATGGGCGCGCACACCACTTTGCCTGTGCGCGTTCCGGCAGCAACATCATCTTTCCTAGTCCTCATTATCATCCTCATTTTTTCGTCGTCTCCTTCATTGTCCTACTCCGATGCCGAAGCCCTCATAAAATTCAGAAGCTCTCTCACCAATGTCGTTGAACTCAGCAGCTGGGATCCGGCGATCAACCCTAAACCTCCATGTACCGGCAATATCGCCAATTGGGTCGGCATTTTTTGCATCAACAACACCGTTTGGGGATTTCGCCTCGAAAACATGGGCCTCATGGGAACCATTGACGTTGAAACTCTTGCTTCCATGCCACATTTAAGGTCAATTAGCTTGATGAACAATTCTTTCGCAGGACCTTTGCCAGAAATCAAGCGTGTGAAGAATTTGAAATCTGTTTATTTATCATATAATCATTTTTCCGGTGAAATTGCTGATGATGCATTTGTGCGTATGCATATGTTGAAGAAAGTTTATTTGGCTAATAATCAGCTTACAGGAAAAATCCCTTCTTCTCTTGGTGTTTTGCCTAATCTTCTTGCCGTTCGGCTTGATGCCAACAAGTTTCATGGTCGGATACCTGATTTTCAGAATAGGACCTTGAAGCTTATTGATATGTCTGACAATGATTTGGAAGGTCCAATTCCAGTGAATCTTACATCTTTCACCTTCGCTTTCTCAGGAAACCCACACTTATGTGGACCTCCTCTTCAGAATCCATGCCCTTCAATCCCTAATGCAACAATGGATTCTCCATCATCAAAGACAGCCATTCTCAGGATTCTTCTCATTTTAGCCCTCACATTACTAATCATGGTAGTGATCGTCTCAGCGATTGTGATAGGCCGCCTGAGAGCACACCGGCGATACATGGCGACCGGAGAGTCTGTCTCGAAGTTCCAAAGCCAGCTTCCGGTGAAATTCGCTCCTCCGTTCTACTCGAAAGCAAAAATCATAGACAGCAACCAAGAGAATACAAAGCAACAAAACAACAACAACAACAACCACCATAACCATCAAAATACGTCACCTTCATCGATACCATCGAGGAAAGGCGAAGCGAAATTGATATTCTTGAGGAAACAAGAGAGGGATTTTGATATGGAGGATTTGTTGAAAGCTTCGGCCGAGGTTTTGGGGAGTGCGGAGTTTGGATCTTCGTATAAGGCAATGATGAGGGATGATCAAGCAGTGGTTGTGAAGAGGTACAAGCAGATGAACAATGTGTCAAAAGATGAGTTCTTTGAACATATGTCAAGGATTGGTGATCTCTCTCATCCAAATCTTCTTCCTCTCGTTGGTTTTTACTATCGGAAAGAAGAGAAACTCTTGCTCACTGACTACGTTCCCAATGGTTGCTTGGCCAGCCAGCTTCATGGTAATCATGACAAAGATAGGCCAAGCTTAGCCTGGCCAACACGTTTGAAAATTGTGAAAGGCGTAGCAAGGGGTTTATCATACCTATACACAGCATTACCAAGCCTAGTTGTACCTCATGGTCACTTAAAATCTTCAAACATTCTCTTAAACGAATCATATGAGCCCTTACTCACTGATTATGCTCTAATCCACGTCACCAATCTGGATCATGCTCAACAAGTCATGATGCCGTATAAGTCGCCAGAGTACGCTCAATTAGGCCGGATCACGAAGAAGACCGACGTGTGGAGTCTAGGCATCGTGATTCTCGAGATCTTAACGGGGAAATTCCCGGAGAACTATCTAACTCCAAGGCATGAAATTAAATCAGACATTGCTAGTTGGGTGAATGGTATGATTACTGATAAGAGAACAAGTGATGTGTTTGATGTTGAAATGGAAGGGATTGAGAATAGCAAGAGTGAATTGCTCAAGCTTTTGAAGATTGGATTGAGTTGTTGTGAGGAGAATGTGGAAAGAAGGTTTGATATAAAGGAAGCTCTTGAGAAAATTGAAGAGTTGAAGGAAGAGAATGATGGAGATTTTTCTTTGATTGTTACTAGTGAAAGGGATGCTTTTCAAGCTATATGA 2016 0.4286 MGAHTTLPVRVPAATSSFLVLIIILIFSSSPSLSYSDAEALIKFRSSLTNVVELSSWDPAINPKPPCTGNIANWVGIFCINNTVWGFRLENMGLMGTIDVETLASMPHLRSISLMNNSFAGPLPEIKRVKNLKSVYLSYNHFSGEIADDAFVRMHMLKKVYLANNQLTGKIPSSLGVLPNLLAVRLDANKFHGRIPDFQNRTLKLIDMSDNDLEGPIPVNLTSFTFAFSGNPHLCGPPLQNPCPSIPNATMDSPSSKTAILRILLILALTLLIMVVIVSAIVIGRLRAHRRYMATGESVSKFQSQLPVKFAPPFYSKAKIIDSNQENTKQQNNNNNNHHNHQNTSPSSIPSRKGEAKLIFLRKQERDFDMEDLLKASAEVLGSAEFGSSYKAMMRDDQAVVVKRYKQMNNVSKDEFFEHMSRIGDLSHPNLLPLVGFYYRKEEKLLLTDYVPNGCLASQLHGNHDKDRPSLAWPTRLKIVKGVARGLSYLYTALPSLVVPHGHLKSSNILLNESYEPLLTDYALIHVTNLDHAQQVMMPYKSPEYAQLGRITKKTDVWSLGIVILEILTGKFPENYLTPRHEIKSDIASWVNGMITDKRTSDVFDVEMEGIENSKSELLKLLKIGLSCCEENVERRFDIKEALEKIEELKEENDGDFSLIVTSERDAFQAI 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1047 671 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 652 - -
Mibi04g1047 671 Gene3D Phosphorylase Kinase; domain 1 339 450 - -
Mibi04g1047 671 SUPERFAMILY L domain-like 64 249 - -
Mibi04g1047 671 Gene3D Ribonuclease Inhibitor 36 151 IPR032675 -
Mibi04g1047 671 FunFam Pollen receptor-like kinase 1 451 658 - -
Mibi04g1047 671 MobiDBLite consensus disorder prediction 327 351 - -
Mibi04g1047 671 Gene3D Transferase(Phosphotransferase) domain 1 451 666 - -
Mibi04g1047 671 Coils Coil 632 652 - -
Mibi04g1047 671 Pfam Leucine rich repeat N-terminal domain 36 79 IPR013210 -
Mibi04g1047 671 Pfam Leucine rich repeat 131 190 IPR001611 GO:0005515
Mibi04g1047 671 ProSiteProfiles Protein kinase domain profile. 375 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1047 671 SUPERFAMILY Protein kinase-like (PK-like) 379 646 IPR011009 -
Mibi04g1047 671 Gene3D Ribonuclease Inhibitor 152 246 IPR032675 -
Mibi04g1047 671 MobiDBLite consensus disorder prediction 327 352 - -
Mibi04g1047 671 Pfam Protein tyrosine and serine/threonine kinase 379 643 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1047 Mibi-ChrMibi04 21132907 21136453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1047 21 667 Receptor kinase-like Gene Family AT5G35390 45.579 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi04g1047 PK_Tyr_Ser-Thr 6.8e-29 CL0016