Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1024 ATGAAGCCAAGGATCTGCGAATTATGCAACAAAGAAGAATCCTACCTGTACTGTGCCTCCGATTCTGCGTTTCTTTGCTGGAAATGCGATGTTAGGGTTCACGATGCCAATTTCTTAGTCGCTCGCCATATCAGAGAAATTCTCTGCTGCGATTGTAACAATCTCTCTGGAAGACAGGTCTCCGGCAGTGTAGCTCCGTTCGAGAAAAAATCCTGCCGGAATTGTTCGCCGGAAAATCCTTCCGACGACGACGAGGAAGATTGCCTGTCTTCGTCTTCCTTGTCGTCGGCCTGCGTCTCAACCACGGCGGAGTCCTCCGCAACAACAGGTCCTAAGAAATTTCCACGACGGACGGAGACAGCCGCATCATCCGCCTCCGTCACGGACAATTTTGAGAGCGAGGCGCTAGGATGTTACAAGAAGAACAATTTCCAGGGTGAGATGCTGGGATGTTACAAGAAAAATAATTTCGAGAGCGAGGCGTTGGGATCTTACAAGAAGAACAATTTCGAGAGCGAGACGCTGGGATGTTACAAAAAGAGGAAGGAGAATATGGTAAGGTGTAAGGCGGAGGAGGTATTTGTGAATTGGAGCAGGAGGTTTGGGGTGAACGGGAATCGTGTGGTGATGATGGCGGCGCCGGCGATGGAGAAGCTAATGGCGGTGGTTCCGTACAGGGTGGCGGCGGCGACGGCGTTTTGGTTTGGTTTGAGGAATTGCGACGGCGAAGGGAAGTTACGTACGGCTGAGAATTTGAGGAGGTTGGAGGAAATGACGAGAGTGCCCCGGAAGGTGATCTTGGCGGCCGAGGAGAAGCTGACACGTGTCCTTAGACCTAAGAAAGCTAGGCGCGAATTAGAAGAAGGGTGGGCTGAGTGCTAA 882 0.5159 MKPRICELCNKEESYLYCASDSAFLCWKCDVRVHDANFLVARHIREILCCDCNNLSGRQVSGSVAPFEKKSCRNCSPENPSDDDEEDCLSSSSLSSACVSTTAESSATTGPKKFPRRTETAASSASVTDNFESEALGCYKKNNFQGEMLGCYKKNNFESEALGSYKKNNFESETLGCYKKRKENMVRCKAEEVFVNWSRRFGVNGNRVVMMAAPAMEKLMAVVPYRVAAATAFWFGLRNCDGEGKLRTAENLRRLEEMTRVPRKVILAAEEKLTRVLRPKKARRELEEGWAEC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1024 293 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Mibi04g1024 293 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 108 - -
Mibi04g1024 293 SMART bboxneu5 1 48 IPR000315 GO:0008270
Mibi04g1024 293 CDD Bbox1_BBX-like 5 45 - -
Mibi04g1024 293 Pfam B-box zinc finger 2 35 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1024 Mibi-ChrMibi04 20780973 20781854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1024 5 71 C2C2-CO-like Transcription Factor Family AT3G21150 46.269 9.38e-15 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi04g1024 zf-B_box 1.1e-05 No_clan