Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1022 ATGGGTGAGTTTCAAATCAATGGCAAGATGGAGAGAGAAGAGGGCGAAGTCGACTCTGTGATGATTTCGAAGATAGTGAAAGAGAGGGTTTTGAAGGCGGCTAAGTCGACTGTGGTAATGCTTGATAGAGAAGACTGTGGGGGAGGGGAGGGAATGAAGGGGGCTGAATTTGAAGAGCAAGAGAGGAGATTTAGTATGGTGAAGAACCTCGACTGCGAGCGCTTATACACAACCTTACAAAACCCTAATTCTTCAAACGCTAAGAGGAGCCGTTCTCTTGCATTGGGAGCTTCCGCTGATAATTTTCAAGAAATGGGTGACGAAGGTAAGACAATTGTTCCAGAGTCCGTGTTGAAGAAGAGGAAGAGAGAAGATGAATGGGCATTGGCCAAGGCACAGGAGACTGAAGTTGCAAAAAAGAAGAGAGCTGAGAGCCGTAAGGTGATCTACAACAGAGCTAAGCAGTTTGCCAAGGAGTATGCGGAGCAGGAAAAGGAGTTGATTAGATTGAAACGCGAGGCAAAGCTGAAAGGTGGATTTTATGTAGATCCAGAGGCTAAATTGTTGTTTATTGTTCGCATCCGTGGTATTAATGCCATGCACCCAAAGACAAGGAAGATCTTGCAGCTCTTGCGTTTGAGGCAGATATTCAATGGCGTGTTTCTTAAAGTTAACAAGGCCACAATGAACATGCTTCACAGGGTTGAACCATATGTAACCTACGGGTATCCAAACTTGAAGAGTGTAAGAGAACTTATCTACAAGAGGGGCTATGGTAAGATCAACAAACAGAGAATCGCTTTAACCGACAATTCCATCATTGAGCAGGCCCTTGGCAAGTATGGAATCATATCTACTGAAGATCTTATCCATGAGATCATAACAGTTGGACCTCACTTTAAGGAGGCCAATAACTTCCTCTGGCCCTTTAAACTCAAGGCACCTTTGGGTGGACTAAAGAAGAAGAGAAACCACTATGTTGAAGGTGGTGATGCTGGAAACAGGGAGAATTACATCAATGAGCTCATTAGGAGAATGAACTAG 1044 0.4416 MGEFQINGKMEREEGEVDSVMISKIVKERVLKAAKSTVVMLDREDCGGGEGMKGAEFEEQERRFSMVKNLDCERLYTTLQNPNSSNAKRSRSLALGASADNFQEMGDEGKTIVPESVLKKRKREDEWALAKAQETEVAKKKRAESRKVIYNRAKQFAKEYAEQEKELIRLKREAKLKGGFYVDPEAKLLFIVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKINKQRIALTDNSIIEQALGKYGIISTEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1022 347 PANTHER 60S RIBOSOMAL PROTEIN L7 111 347 IPR039699 -
Mibi04g1022 347 Gene3D - 188 288 IPR036919 -
Mibi04g1022 347 Gene3D - 289 347 IPR036919 -
Mibi04g1022 347 FunFam 60S ribosomal protein L7 188 292 - -
Mibi04g1022 347 Pfam Ribosomal protein L30p/L7e 189 239 IPR016082 -
Mibi04g1022 347 CDD Ribosomal_L7_archeal_euk 188 347 IPR035808 -
Mibi04g1022 347 Pfam Ribosomal L30 N-terminal domain 113 184 IPR012988 -
Mibi04g1022 347 FunFam 60S ribosomal protein L7 293 347 - -
Mibi04g1022 347 TIGRFAM uL30_euk: 60S ribosomal protein uL30 114 347 IPR005998 GO:0000463|GO:0003735|GO:0022625
Mibi04g1022 347 SUPERFAMILY Ribosomal protein L30p/L7e 188 347 IPR036919 -
Mibi04g1022 347 Coils Coil 153 177 - -
Mibi04g1022 347 ProSitePatterns Ribosomal protein L30 signature. 207 239 IPR018038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1022 Mibi-ChrMibi04 20749725 20755345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1022 108 347 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 83.750 2.71e-152 426