LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi04g1014	ATGAAGCTTAATATTCTTGTTATTATTCCAACAGAGATTTAAAAAAGCATGGACAGTATAGAAGCCACCAGGAAGTACTTGAAATCTAGCTTAGAAATATCAGATGCTATTTCTTCTGCATTAGATGATTCTGGCTCAAGATTGGAGATACTTAACCAGAAATGCCAGTCCTTGGAAGCTACAATCAGGCCCATCTGTACAAAGGACTTCTCATTTCTCGATATTGGAGACCGAATCGATGGTGTTCTGTGTTCTGCTGCTGCAATCCTCAAGGTGTTTGATGCAATTCGTCCCCTGGAAAACTCTCTCCTGACTGGTGAACCCGGTTATGATCTTTTCACTTATATCTCAGACACAAAGAAGTTTGAAGAAGCCCTCAAGCTTCTAACTGATAATTGCACATTAGCAATTGGTTGGTTGCAGGAAATTCTTGAGTTGCTCTTGCAAGACAAAGCTGTCATCTTCTCTAATGAGTTTTGCTTATTGAATGTGAAGAAATCTCTGAAAATATTACAAGAATTGCAGTCCATGGAGGAACGTGCTTACCTTGATGGAGGCCTTCTCAATGCAGCTTTTGATAAGCTAGAGATCGAGTTCAAGCGGCTTCTGATAGCTAACTCGCTTCCTCTCCCTTTATCTCCATTAACATCATCATCCCTTGACCAGAAAGCCACCATACCAGTTTTGCCAGATTCTCTCACAGGGAAATTACAAGCCATTGTTGAGAGATTATTGCATGCTCATGGCAGGCTAGACAAGATTAAATCCATATTTGTTGAAGTTCGAGGAATGAACACACGAAGAAGCTTGCAGGCTTTAGATTTGAGCTATCTGGAGAGTCCAAAAGCAAAATTTGAGGATATACATAGCATAGAGAGTTACACAGCACAATGGGGTAAGCATCTAAAGTTGGTAGCAAATCACTTACTTGAGATGGAGCACAGGTTCTCCAGTAAAATCTTTGAGAAAATAGGAGCAGAAGCATGGAAGGGATGTTTTGCCAAGATTGCCATTGAGTCAAAAATTTTCTCTTTCCTTCAATTTGGAATAAATGTCACTGAGAGCAAAACTGACCCCATGAAGTTATTGAAGCTCCTGGAGATTTTCAGTGTCTTGAATGATCTGAGACTAAAGTTCAACAAGCTTTTCAGTGGGGAAGCTTGTGATGAAATCAGAACAGTGACAAAGGATCTTATCAGTAGAGTCATTAATGGTGCTTGTGAGATTTTCTGGCAGCTTCCTGCGCAAGTAAAGTCGCAGAGGCCGAGCTCTCCTCCCACAGATGGCAGTGTTCCTCAGCTCGTAAGCTTTGTAACCAGTTACTGCAACGAGCTCCTCGGAGATACCTACAGGCCACTTTTGACACAGGTTCTGGAAATTCATCAAAGTTGGAGAGATGAAGCATATGAAGAGTGCATCATTTTCACCCAAGTTTTCAGCATAGTGAAGGAAATAGCAGTTAATTTAGATGCATGGTCAAAGGCCTATGAAGATATCACTTTATCCTATGTCTTCATGATGAATAATCATTGCCATTTCCAAAATTTGAAGGGCACTATGCTTGGGAACATGATGGGAGACTCATGGTTAAAAGCACATGAGCAATATAAAGACTATTATGCTGCTCTTTATCTGAAACATACATGGGGAAAGATCTTGCCTATTCTAAACAAAAAGGATACACTTTCAGTTTCAGTTTCAGTTTCAATTTCATCTTCTGATATGGCTAAGAGACTGAATTCTTTCAATGTGGCATTCGATGAAATGTACAAGAGGCAATCAAATTGGGTGATATCTGATGAAACCTTGAGGGAGAAAGTGAGGAAGCATATAGTTGAAGGGATGGTGCCAAGCTATAGAAGCTTCATGAAGAACTATAGTTTAACAATGGAGAATGATGAGAAGGGTGTGAAGTGTGTAAAATACACAGAGCAGAATTTGGAGAAGATGCTTTGGTCCCTGTTTGAGCTGAAGATAAGCAAGTATGGGAGCATGAAGCAAGTACAGTTTATGAGTAAAATAAAACAAATGAGTGCTCAGTTGTTCACTATAGCTACTACTCTGTAA	2067	0.3996	MKLNILVIIPTEIXKSMDSIEATRKYLKSSLEISDAISSALDDSGSRLEILNQKCQSLEATIRPICTKDFSFLDIGDRIDGVLCSAAAILKVFDAIRPLENSLLTGEPGYDLFTYISDTKKFEEALKLLTDNCTLAIGWLQEILELLLQDKAVIFSNEFCLLNVKKSLKILQELQSMEERAYLDGGLLNAAFDKLEIEFKRLLIANSLPLPLSPLTSSSLDQKATIPVLPDSLTGKLQAIVERLLHAHGRLDKIKSIFVEVRGMNTRRSLQALDLSYLESPKAKFEDIHSIESYTAQWGKHLKLVANHLLEMEHRFSSKIFEKIGAEAWKGCFAKIAIESKIFSFLQFGINVTESKTDPMKLLKLLEIFSVLNDLRLKFNKLFSGEACDEIRTVTKDLISRVINGACEIFWQLPAQVKSQRPSSPPTDGSVPQLVSFVTSYCNELLGDTYRPLLTQVLEIHQSWRDEAYEECIIFTQVFSIVKEIAVNLDAWSKAYEDITLSYVFMMNNHCHFQNLKGTMLGNMMGDSWLKAHEQYKDYYAALYLKHTWGKILPILNKKDTLSVSVSVSISSSDMAKRLNSFNVAFDEMYKRQSNWVISDETLREKVRKHIVEGMVPSYRSFMKNYSLTMENDEKGVKCVKYTEQNLEKMLWSLFELKISKYGSMKQVQFMSKIKQMSAQLFTIATTL	688

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi04g1014	688	SUPERFAMILY	Cullin repeat-like	89	656	IPR016159	-
	Mibi04g1014	688	Pfam	Exo70 exocyst complex subunit	297	651	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Mibi04g1014	688	Coils	Coil	41	61	-	-
	Mibi04g1014	688	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	164	656	IPR004140	GO:0000145\|GO:0006887
	Mibi04g1014	688	Gene3D	Exocyst complex component Exo70	156	661	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi04g1014	Mibi-ChrMibi04	20603519	20606984	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi04g1014	11	675	EXO70 exocyst subunit family	AT4G31540	48.669	0.0	620