Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1009 ATGATACTCCTATTTTTATTGATCATATGCTTGTCTGCTCCACTATACACTGCTTCTGTGTTGAGTTCTGATGGGATAACTCTATTGTCTCTTCTCAACCAGTGGACTTCTGTGCCTCCTTTTTTAAAGTCAAGCTGGAATTCCTCTGATTCCACCCCTTGCTTGTGGAATGGAATACAATGTGATCAGTATGGCAAGGTGATCTCCCTGAACTTAACTGAATACAACATTGTTGGTCAACTAGGACCAGAAATTGGTCAGTTGACTCATTTGCAGAACCTTGTGTTGGTGAAAAATGGTTTCTCAGGAGCAATACCTCTAGAATTGGGCAATTGTAGTCTGCTTGCGTATATTGACCTTTCTGATAACTCCTTTAGTGGAAGCATTCCATATACATTGAAAGCATTGCAAAAGTTGAAGTATGTTCGTTTTTCTTCCAATCTGCTCAGTGGTGAGATTCATGAGTCATTGTTTCGGATTCCTGAACTGGAGGGGATTGACCTTCACAATAACAATCTAAGTGGTCCCATCCCATCCAATATTGGAAACTCCACTGAATTGGTGAGGCTGCATCTATCTAGCAATCATTTGTCAGGAACCATCCCCTCTTCCATAGGTAACTGCAGTAAACTAGAGGCATTTTTTCTGAATAATAACATGTTGACAGGAATTTTGCCTCAGAGTCTGAACAATCTGAAAAATCTTGCTTATTTAGATGTCAAAAACAATAGCCTCGGTGGTACCATCCCTCTTGGCTCTGGAAGTTGTGGCAATTTATTTATTTTGGATCTGTCGTTCAATGTATTTAGTGGAGGCATTCCCTCAGGCTTGGGGAATTGTAGCAATTTAGCAGAACTTGCTGCTGTGAAGAGTAACTTTGTTGGAAGCATTCCATCATCCCTAGGATTATTGCTAAAGATTTTAATTCTTCGCCTTCCTGAGAACCATTTGTCTGGAAATATACCTCCAGAAATTGGGAACTGCAAATCTTTGAGAAAGCTACACCTATATTCCAACCAACTGGGGGGAGCAATTCCAAATGAATTGGGAGGACTAAGTAAATTGGAGGACCTTGAACTGTACTCCAACAGTTTAACAGGTCTTAATCAACTTCAAGGGGGTATACCTCAAGATTTGGGAAGATGTGCAACTCTTAGGAGGTTGGTTCTCAATGAAAATAATCTTTCTGGGTCTCTTCCTTCCTTTGAAGGTGATCAGAATCTCATATACATGGACATGAGCAAGAACAACATTAGTGGAGTAATTCCATCAAGTTTGGGAAACTGCACAAGTCTCACAGCACTAATTTTGTCCGAAAATGGCATTGCAGGGCATATACCCTTAGAGCTAGGAAATCTTGTGAACCTTCAGGCTTTGAATCTTGCTCACAACAACCTAGAAGGTCCTCTGCCACCGCAGCTGTCACACTGTACCAAAATGTTGACATTTGATGTGGGATTCAATTTTCTTAATGGTTCTTTCCAATCAAGCATGACAAGCTGGACGGCCTTAACCTCATTAGTTTTAAGAGAGAATCGCTTTAGTGGGGATATCCCATCTTTCTTTTCAGAATATGTCCAGCTTCTTGAACTACAACTTGGAGGTAATGCCTTTGAGGGGAAAATTCCTCCATCAATTGGATCGTTGCAGAATCTCTTATATGAGTTGAATCTGAGTGCTAATAAGTTAAATGGTGAGATTCCCATAGAAATCATGAAGTTGCAAAAGCTGCAAAGCCTGGATATATCCCTGAACAATTTGACAGGGAGCATACATGTTCTTAGTGAACTTTCTTCATTAACAGAATTCAATATATCGTACAACTCATTTGTTGGCCCTTTACCAGAATGGAGAATGCAACAACTGAATTTATCTCCATCATCTTTCTTGGGAAATCCTGGCCTCTGTGTCCGTTGTTCAACTTCAAATGTGTTGAGTTGCAAAAATAATAACCTTTTAAAACCATGTGACACTGAATCAACTGATCGCAAAGGCAGTAAACAATCAATTTTATTTATTGCACTTGGATTTGCAGTGTATGTCATATGCTTGTTGGGAATACTATTACTTTATGACCGCCATTATGGCCAAATACCCAAGGAAGAAGAGAAAAAGGAAGTTCTTTCTTTTTATGATGTACAATCTTATGTCGATGACCTTTGTCGAAAACCTGTGCTGGTGGTGAATGCTGATTATGAAGAGCGAGAGGCTCTGTATTCAAATGATGAAGGAGATTTCAGAATTATTGATATACTAAATGCTACAGACAATCTGCATGATCGATTCATAATTGGCCAAGGAGGGCATGGGATTGTATATAAAGCCGAGCTTGATATTGGAGTTTTTGCTGTTAAGAAGGTTAAATTTGAGCGTAGCAATAGGAGGAAGTTAAACGTGATCAAGGAAATTGGGATGACTAGGAAGATTAGGCATCAGAATGTGGCAAGATGCCAAGGCTTCTGGATCGGTGAGGAATATGGTCTAATCATCAGCAAGTACAAGGAAAATGGTAGTCTTCATGATGTTTTGCATGAACAGAATCCACAAACATCATTAGCATGGAATGTCCGCTACAAGATTGCTGTTGGAGTTGCAAAAGGATTAGCATATCTCCATCACGATTGTGATCCTCCCATATTGCATCGAGACATCAAACCAAAGAATATACTCCTTGATTCTGATATGCAACCTTGTATTATTGATTTTGGTATTTCCATTGCTTTGAATCAATCCTCTGCTACGATGAATATGCGGTCAACATATCATCTAGGTACACCTGGGTTTATGGCACCAGGTGTTTTTGTTCAATATGCCAGAGCTCAATTTCATTTGGGGACTTTCCTCACTACTGCATGGGCCTCTAATCCGTACATGATTTCCGGAAGAACTCGTGGAGTTGTTTATGAAGCAAAACTACATTCAGGCCAAGCTTGTACTGTAAGGGAGGTTACATTTGCTGGGAACATGAGCAATATGGTAGGCATGGCTAGAGAAATTGAAATCCTTAAAAAGATTAGGCACCAAAATGTGGTCAGAATGCTAGGGTATTCGCTTACAGAAGACTTTGGTATAGTCCGCTACGAGTACATGCCAAATGGAAACCTTCATGATGTTTTGCATGGAAAGAATCCACCACCATCCCTGAAATGGAATGTCCGATTTGCTATAGCAACTGGAATTGCTCATGGATTGGCTTATCTTCATTATGATTGTCTTCCTGCCATAGTGCATGGTGCCATCAATCCAAGAAATATACTTCTAGATTCTGATATGGAACCTCATATTGCTAATTTCGGTTTTGCCCAGTTTTTGGATCAATCTTCTTCAACTCCATCTTCATCTTTTCAAACCACAGTTAAAGTGCTACATTCTGGCCGAGTTTGTGCTGAAAGGAAGGTTACATCTGCTTGGAACAAAGACGATATCTTAAGAATGACTAAAGAAATTCAAATCCTTGAAAAGATTAGGCACCGCAATATAGTTAGAATTGTAGAGTATGTGCTTAGAGAAAGCTCCGGTATAATCTGCTTCGAGGACATGCCAAATGGAAACCTTCATGATGTTTTGTTTGTAAAGAATCCACCACTATCCCTGAAATGGAATGTCCGTTTTACTATAGCAACTGGAATTGCACATGGATTGGCCTATCTTCATTATGATTGTGACCCTCCCATTGTACATGGTGCCATCAAACCAAGAAATATCCTTCTAGATTCTGATATGGAGCCTCATATTGCTGATTTCAGCTATGCCTACTTTGTGGACCAATCTTCAGCTCCAGGTCGTTCTCTTCTGTCCAGAGTGGATTGGTCCCGTGCACATCGCTAG 3828 0.4002 MILLFLLIICLSAPLYTASVLSSDGITLLSLLNQWTSVPPFLKSSWNSSDSTPCLWNGIQCDQYGKVISLNLTEYNIVGQLGPEIGQLTHLQNLVLVKNGFSGAIPLELGNCSLLAYIDLSDNSFSGSIPYTLKALQKLKYVRFSSNLLSGEIHESLFRIPELEGIDLHNNNLSGPIPSNIGNSTELVRLHLSSNHLSGTIPSSIGNCSKLEAFFLNNNMLTGILPQSLNNLKNLAYLDVKNNSLGGTIPLGSGSCGNLFILDLSFNVFSGGIPSGLGNCSNLAELAAVKSNFVGSIPSSLGLLLKILILRLPENHLSGNIPPEIGNCKSLRKLHLYSNQLGGAIPNELGGLSKLEDLELYSNSLTGLNQLQGGIPQDLGRCATLRRLVLNENNLSGSLPSFEGDQNLIYMDMSKNNISGVIPSSLGNCTSLTALILSENGIAGHIPLELGNLVNLQALNLAHNNLEGPLPPQLSHCTKMLTFDVGFNFLNGSFQSSMTSWTALTSLVLRENRFSGDIPSFFSEYVQLLELQLGGNAFEGKIPPSIGSLQNLLYELNLSANKLNGEIPIEIMKLQKLQSLDISLNNLTGSIHVLSELSSLTEFNISYNSFVGPLPEWRMQQLNLSPSSFLGNPGLCVRCSTSNVLSCKNNNLLKPCDTESTDRKGSKQSILFIALGFAVYVICLLGILLLYDRHYGQIPKEEEKKEVLSFYDVQSYVDDLCRKPVLVVNADYEEREALYSNDEGDFRIIDILNATDNLHDRFIIGQGGHGIVYKAELDIGVFAVKKVKFERSNRRKLNVIKEIGMTRKIRHQNVARCQGFWIGEEYGLIISKYKENGSLHDVLHEQNPQTSLAWNVRYKIAVGVAKGLAYLHHDCDPPILHRDIKPKNILLDSDMQPCIIDFGISIALNQSSATMNMRSTYHLGTPGFMAPGVFVQYARAQFHLGTFLTTAWASNPYMISGRTRGVVYEAKLHSGQACTVREVTFAGNMSNMVGMAREIEILKKIRHQNVVRMLGYSLTEDFGIVRYEYMPNGNLHDVLHGKNPPPSLKWNVRFAIATGIAHGLAYLHYDCLPAIVHGAINPRNILLDSDMEPHIANFGFAQFLDQSSSTPSSSFQTTVKVLHSGRVCAERKVTSAWNKDDILRMTKEIQILEKIRHRNIVRIVEYVLRESSGIICFEDMPNGNLHDVLFVKNPPLSLKWNVRFTIATGIAHGLAYLHYDCDPPIVHGAIKPRNILLDSDMEPHIADFSYAYFVDQSSAPGRSLLSRVDWSRAHR 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1009 1275 SUPERFAMILY Protein kinase-like (PK-like) 1114 1258 IPR011009 -
Mibi04g1009 1275 SMART LRR_typ_2 453 477 IPR003591 -
Mibi04g1009 1275 SMART LRR_typ_2 232 256 IPR003591 -
Mibi04g1009 1275 SMART LRR_typ_2 352 373 IPR003591 -
Mibi04g1009 1275 SMART LRR_typ_2 160 184 IPR003591 -
Mibi04g1009 1275 SMART LRR_typ_2 185 208 IPR003591 -
Mibi04g1009 1275 ProSiteProfiles Leucine-rich repeat profile. 576 598 IPR001611 GO:0005515
Mibi04g1009 1275 ProSitePatterns Protein kinases ATP-binding region signature. 764 786 IPR017441 GO:0005524
Mibi04g1009 1275 SUPERFAMILY Protein kinase-like (PK-like) 963 1111 IPR011009 -
Mibi04g1009 1275 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 369 931 - -
Mibi04g1009 1275 Gene3D Transferase(Phosphotransferase) domain 1 953 1123 - -
Mibi04g1009 1275 Gene3D Transferase(Phosphotransferase) domain 1 747 947 - -
Mibi04g1009 1275 SMART serkin_6 758 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1009 1275 SUPERFAMILY L domain-like 369 636 - -
Mibi04g1009 1275 SUPERFAMILY Protein kinase-like (PK-like) 746 937 IPR011009 -
Mibi04g1009 1275 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 273 - -
Mibi04g1009 1275 ProSiteProfiles Protein kinase domain profile. 1104 1275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1009 1275 Gene3D Transferase(Phosphotransferase) domain 1 1124 1272 - -
Mibi04g1009 1275 ProSiteProfiles Protein kinase domain profile. 758 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1009 1275 FunFam Os07g0541700 protein 835 924 - -
Mibi04g1009 1275 FunFam Leucine-rich repeat receptor-like protein kinase 22 178 - -
Mibi04g1009 1275 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 274 367 - -
Mibi04g1009 1275 SUPERFAMILY RNI-like 69 368 - -
Mibi04g1009 1275 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Mibi04g1009 1275 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
Mibi04g1009 1275 Pfam Protein kinase domain 763 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1009 1275 Pfam Protein kinase domain 1124 1258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1009 1275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 879 891 IPR008271 GO:0004672|GO:0006468
Mibi04g1009 1275 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 368 645 - -
Mibi04g1009 1275 Pfam Leucine rich repeat 384 442 IPR001611 GO:0005515
Mibi04g1009 1275 Pfam Leucine rich repeat 186 245 IPR001611 GO:0005515
Mibi04g1009 1275 Pfam Protein tyrosine and serine/threonine kinase 964 1110 IPR001245 GO:0004672|GO:0006468
Mibi04g1009 1275 FunFam Os07g0541700 protein 1180 1266 - -
Mibi04g1009 1275 Gene3D Ribonuclease Inhibitor 182 253 IPR032675 -
Mibi04g1009 1275 Gene3D Ribonuclease Inhibitor 254 305 IPR032675 -
Mibi04g1009 1275 Gene3D Ribonuclease Inhibitor 306 368 IPR032675 -
Mibi04g1009 1275 Gene3D Ribonuclease Inhibitor 369 646 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1009 Mibi-ChrMibi04 20580540 20587641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1009 12 941 Receptor kinase-like Gene Family AT1G73080 41.416 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi04g1009 Pkinase 5.9e-32 CL0016