Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1007 ATGGCTTTCTGGGGAGTGGAAGTCAAACCAGGAAAATCCTTTACTCATAAATTTGATGACTTGAAAGGACGTCTACATATTTCAATGGCCACTTTGGGGGTTGGTTCTGCCCCAACCAAAAGCAGACTTCAGTGTAATGTAGGCAACAATAGCCCTGTTTATTTATGTTCTCTGTCTTCTGGAACGAACGAATCAATGCAACTTAATTTGGAATTTGAGGAGGTTGATGATGTCATCTTTTCAGTGATTGGTCCTCGGAGTATTCACTTGTGTGGATACTATCTTGGAAATGGCCGAAGAACCAATATGATTGAGGAGTCAGAGTCATATGGAGAAGATATTGCAAACACCGAGACAGATAGATCTAATTGCAGTGAGGAAGATGAGTATGAGGATAGTTTTATTGATGATGATGCCAATCCAGAGGTCTGCTCAGAATCACCCATTTTAAGTGAAGAGGAAGCTTCACCTGTTAATAAACGCAAAGGTAGTCGTCGCCGACTTCAGAGGAAGCACCAAAGAGTAGACTCAGATGATGACATTTTGCCGATTTCATCTATTTATAAGAGCAAAGCTTCTGCAAAGGTCTTGTCTGAGGAAATGGATGTTAGTGATGACAGGAGAGGAAGTGATGCCCAGCACGAGAATGGTGAAAATACTGGCGACAATTCCATTAAATCAAATTCAGTATCGAAAGCTGGCAATGTTCTTCTTGATACTAAGACACATAGGGATGTTGCATTGCCTGCCACTGTAGGAGGTCCTGTAAAAAGTGAAGGAACGAAGAGGAAAAGGAAAGAACAGACTCCCAAAGATTCACATTTTGAAGATGACAGTGCTTACAGTAAAGAGTCCAAAGCCCAAATGGATCCGGCAGAGACTGATGGTGCGATCCCCAAATTTTCTGAAGGAAAGGATCATAATTTGCAACAAAAAAGAAGAGAGAGAGAGGACAATAACACTCATGACTTTCCTGATGGGGATCAATCTAATGATAGAAAAATGAAGAAAAGGAGGAAAAAAGACAAAAGTCAAGGGGATATAGAAGTTAAAACTTCTGATATGCTACACTCATCTGTTAATGAAAATATTAGGACTGTGAAAAAGAAGGAAAACACTTCGGCTGATGCGAAGCCTTCTGAAGTTAAAACATTGCCAAGCGGTTTAGTTATTCAAGAGCTAGAAAAGGGGATCGAAGATGGAAAAATTGCTGCATCAGGAAAAAAGATTAGTGTCCTTTTCACTGGCAAGTTGAAGGATAATGACGAAGTCTTTGAATCAAATGTTGGCCATGCACCTTTTAAGTTTCGCCTTGGTACTGCCAGCCTACGTAAAGGACAAGTTTTAGAGGGTTGGGATATTGGCCTTGAAGGCATGCGAATGGGAGAAAAGAGAAGACTCATAATCCCACCATCCATGGGGTTTGGTAGTGAGGGACACAACACAAAAGTACCGCCAAACTCGTGGCTGGTTTATGACTTCAAATTGGTTAAAGTCCGCTGA 1503 0.4112 MAFWGVEVKPGKSFTHKFDDLKGRLHISMATLGVGSAPTKSRLQCNVGNNSPVYLCSLSSGTNESMQLNLEFEEVDDVIFSVIGPRSIHLCGYYLGNGRRTNMIEESESYGEDIANTETDRSNCSEEDEYEDSFIDDDANPEVCSESPILSEEEASPVNKRKGSRRRLQRKHQRVDSDDDILPISSIYKSKASAKVLSEEMDVSDDRRGSDAQHENGENTGDNSIKSNSVSKAGNVLLDTKTHRDVALPATVGGPVKSEGTKRKRKEQTPKDSHFEDDSAYSKESKAQMDPAETDGAIPKFSEGKDHNLQQKRREREDNNTHDFPDGDQSNDRKMKKRRKKDKSQGDIEVKTSDMLHSSVNENIRTVKKKENTSADAKPSEVKTLPSGLVIQELEKGIEDGKIAASGKKISVLFTGKLKDNDEVFESNVGHAPFKFRLGTASLRKGQVLEGWDIGLEGMRMGEKRRLIIPPSMGFGSEGHNTKVPPNSWLVYDFKLVKVR 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1007 500 MobiDBLite consensus disorder prediction 195 215 - -
Mibi04g1007 500 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 403 496 IPR001179 GO:0003755
Mibi04g1007 500 MobiDBLite consensus disorder prediction 258 290 - -
Mibi04g1007 500 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Mibi04g1007 500 SUPERFAMILY FKBP-like 367 499 - -
Mibi04g1007 500 MobiDBLite consensus disorder prediction 299 335 - -
Mibi04g1007 500 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 407 500 IPR001179 GO:0003755
Mibi04g1007 500 MobiDBLite consensus disorder prediction 193 358 - -
Mibi04g1007 500 MobiDBLite consensus disorder prediction 111 179 - -
Mibi04g1007 500 MobiDBLite consensus disorder prediction 216 236 - -
Mibi04g1007 500 Gene3D - 355 500 IPR046357 GO:0003755
Mibi04g1007 500 MobiDBLite consensus disorder prediction 124 139 - -
Mibi04g1007 500 Gene3D Nucleoplasmin core domain 1 98 - -
Mibi04g1007 500 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1007 Mibi-ChrMibi04 20556915 20562293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1007 371 500 Calmodulin-binding Proteins AT5G48570 33.333 6.28e-14 72.4