Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1006 ATGGTACACCAAATTTTGTTCTTCATATGCTTGTCTACTTCTTTACATGTTGCTTCTTCTTTGAGTTCAGATGGGTTGACTCTATTGTCTCTTCTCAACCAGTGGACTTCTGTGCCTCCTTTCTTAAAGTCAAGCTGGAATTCCTCTGATTCCACCCCATGCTTGTGGAATGGAATACAATGTGATCAATATGGCAAGGTGATCTCCCTGAACTTAACTGAATACAACATTTTTGGTCAACTAGGACCAGAAATTGGTCAGTTGACTCATTTGCAGAACCTTGTGTTGGTGAAAAATGGTTTCTCAGGAGCAATACCTCTAGAATTGGGCAATTGTAGTCTGCTTGTGTATATTGACCTTTCTGATAACTCCTTCAGTGGAAGCATACCATATACATTGAAAGCATTGCAACAGTTGAAGTATGTTCGTTTTTCTTCTAATCTGCTCAGTGGTGAGATTCCTGAGTCATTGTTTCAGATTCCTGAACTGGAGGGGACTGATCTTCACAATAACAATCTAAGTGGTCCCATCCCATCCAATATTGGAAACTCCACTGAATTGTTGAGGTTGCATCTATCTAGCAATCAGTTGTCAGGAAACATCCCCTATTCCATAGGTAACTGCAGTAAACTAGAGGCATTGTTTGTGAATGATAACATGTTGACAGGAATTTTGCCTCAGAGTCTGAACAATCTGAAAAATCTTGCTTATTTAGATGTCAAAAATAATAGCCTCGGTGGTACCATACCTCTTGGCTCTGGAAGTTGTGGCAAGTTATTTATTTTGGATCTGTCATTCAATGTATTTAGTGGAGGCATTCCCTCAGGCTTGGGGAATTGTAGCAATTTAGCAGAACTTGCTGCCGTGAAGAGCAACTTTGTTGGAAGCATTCCATCATCCCTAGGATTATTATCAAAAATCTCAATTCTTCGCCTTCCTGAGAACCATTTGTCTGGAAATATACCTCCAGAAATAGGGAACTGCAAATCTTTGAGAAAGCTACACCTATACTCCAACCAACTGGGGGGAGCAATTCCAAATGAATTGGGAGGACTAAGTAAATTGGAGGACCTTGAACTGTACTCCAACAGTTTAACAGGTGAAATTCCACTCACCATTTGGAAGATTCAAAATCTTAAGCATGTCCTTCTTCATAATAATAGCCTTTCTGGTAAACTACCTCCAGAGATGACAGAGCTGAAGCATCTGAAAAATATCGCATTGTTTGACAACCAATTCTCGGGACCAATTCCTCAAAACTTGGGAATCAACAGCAGTTTAGTGAAGCTAGACTTGATGAATAATGCGTTTACTGGTGATATCCCCCCAAATCTTTGTTTTGGAAAGAAACTACGCACACTGAATTTAGGTCTTAATCAACTTCAAGGGGGTATACTTCAAGATTTGGGAAGATGTGCAACTCTTAGGAGGTTGGTTCTCAATGAAAATAATCTTTCTGGGTCTCTTCCTTACTTTGAAGGTGATCAGAATCTCATATACATGGACATGAGCAAGAACAACATGAGTGGAGTAATTCCATCTAGTTTGGGAAACTGCACAAGTCTCACTGCACTAATTTTGTCCACTAATAGTATTACAGGGCTTATACCCTTAGAGCTAGGAAATCTTGTGAACCTTCAGGCTTTGAATCTTGCTCACAACAACCTAGAAGGTCCCTTGCCACTGCAGCTGTCATACTGCACCAAAATGTTGACATTTGATGTGGGATTCAATTTCCTTAATGGTTCATTCCCATCGAGCATGAGGAGCTGGACGGGGTTAACCGCATTATTTTTAAGAGAGAATCACTTTAGTGGGGATATCCCATCTTTCTTATCAGAATATGACCAGCTTCTTGACCTACAACTTGGAGGAAATATGTTTGTGGGGAAAATTCCTGCATCAATTGGATCATTGCAGAATCTTTTATATGGTTTGAATCTGAGTTCTAATAAACTAGCTGGTGAGATCCCTTTAGAAATTGGGAAGTTGCAAAAGCTGCTTAGTCTGGATATATCCCTAAACAGTTTGACAGGGAGCATACATGTTCTTGGTGAACTTTCTTCATTAATTGAAATCAATATATCATACAACTCGTTTTTTGGTCCTTTACCTGAATGGAAAATGAAACCTTTGAACTTGTCTTCATCATCATTCTTTGGTAATCCTGGCCTTTGTGTCCATTGTTCAACCTCAAATCGTTCAAGTTGCATAAACTCTGGCCTCTTGAAGCCATGTAACTCTGAATCTACTGAACATAAAAGAAGTAGACGTTTAATTTTATTTATAGCACTTGGATTTGTGGGGTTTGTTATCTTTCTGTCAGAAATACTACTAATTTACAACCATCATTCTAGACAAAGATCTAAGGAGGGGGGCCTTACTTTTGCTGATGAGCAAATTTACATACACCAAATGGGTCAAAGATCTGAACTGAAGGCCAGTGTTGCAGATTACGAAGTGCAGGAGATTTCATATTCAAACGATGAAGGGGATTTCAGAGTTATTGACCTAATGAATGCTACGGAGAATTTACATGACCAATACATCATTGGTGAAGGAGGGCATGGAACAGTTTACAAAGCCAAACTTGATAATGGAGTTTTTGCTATTAAGAAGATTAAATTTGGACAAAGAAATAGGAGGAAACTAAACATGATCAAAGAAGTTGAAATGATGAGGAAGATTAGGCATCAAAATGTGGCAAGATGCCTAGGCTCCTGGATAGGCGAGGAATATGGCTTAACCATTAGCAGGTACATGGAAAATGGAAGCCTTCATGATGTTTTACATGAAAATGATCCACTGCCTTACTTAGCATGGAATGTCCGCTATAAAATTGCTATCGGAATTGCGAAAGGACTTGCATATCTCCATCATGACTGTGATCCTCCCATATTGCATAGAGATATCAAACCTAAGAATATACTGCTTGATTCTGATATGCAACCTCGAATTACTGATTTTGGTATTTCCATTGCTTTGAATCAATCCTCTACTACATTGAATATACGGTCAACATATCATCTAGGTACACGTGGATTTATGGCACCTGAGATTGCATGTGTGATAGTGCCAAGCTGTGATCTTGATATATATAGTTATGGTGTAGTTTTGCTAGAGCTGATAACTAGAAAGAAAGTGTTAGATTCCTCATTCATGATGGAGGAAACCACATTAGTAGGGTGGTTTAAATCTGTATGGAGGACAACAAGAGAACTTGAAGAGATCGTTGATTCTAGCATTGCAAGGGAGCTTTCAGATTTAAATGTGATGGTGCAAGTTATCAAAGTGATTTTGGTGGCTTTGATATGTACTGAGACAGATCCAGGAAAGAGATTGAAAATGAGAGATGTTGTGGAATTCTTTGAAACATCCACAGATCCAGGAATTTTTGTTAGACATTATGGAGAATTTCATTTGGGGAGTTCTCTTGCTAGTGCCGTAGCCTCTATGTTTTTTCAGGAAGCCAGGATCCCTGCCAATAGAGATTATTCCTCAATTCTTCGTGAAGTGATGGAGGCTGCTGCAAGCCCAAACAATCTGAATATTATCAGTAGAGGAACTCATGGAGTTGTTTATAAAGTTCATCTAGGTCCAGACCTAGTTTATGCTGTAAAGAAGCTGGCATTTGCAGGAAACAAAGGGAAGATCCAAAGCATTGTCAGAGGGATCAAAATCCTGATAAAGATTAGGCACAGAAATCTTGTGGAATTACTGGACTTTTTGTTCACAAAGGACTATGGTATAATTTTATACAGTTACATACCAAATGGAAACCTTCATGATGTTTTGCATGAAAGGAATCCACCACCATCGCTAGGTTGGACTGTCCGACATAGGATAGCAGCTGGAATTGCTCATGGATTGGCTTATCTCCATTATGACTGTTATCCTGTCATTCTGCACCGTGCCATCAAAACAAAAAATATACTTTTAGATTATAATATGGAGCCTCATATTGCTGATTTCAGTATAGCCAAGCCTTTGGATCAATCTTCTTCTAAACCATCTTCATCTGTTCCAGAGAATACATATACAACAGCAAATACTAGGGAGTCTGATGTGTACAGTTTTGGGATAGTTTTGCTTGAGTTGATAACTAGAAAGAAGGCAGTGGATCCATCATTCATGGAGGGAGTTGAGATAGTAGGTTGGGTCAGAACTCTATGGCAGGAAACAGGAGGAATTTATAAAATTATCGACTCAAGCCTATCCGAGGAGGTTTCAAATCCAAATGTTCTTAAACGAATCATCAATGTTCTTTTGGTGGCTCTGAGATGCACTGAGGAGGATCCAGAAATGAGGCCTACTATGAGAGATGTTATCAACCAATTGAAAGATGCACATATTTGA 4356 0.3903 MVHQILFFICLSTSLHVASSLSSDGLTLLSLLNQWTSVPPFLKSSWNSSDSTPCLWNGIQCDQYGKVISLNLTEYNIFGQLGPEIGQLTHLQNLVLVKNGFSGAIPLELGNCSLLVYIDLSDNSFSGSIPYTLKALQQLKYVRFSSNLLSGEIPESLFQIPELEGTDLHNNNLSGPIPSNIGNSTELLRLHLSSNQLSGNIPYSIGNCSKLEALFVNDNMLTGILPQSLNNLKNLAYLDVKNNSLGGTIPLGSGSCGKLFILDLSFNVFSGGIPSGLGNCSNLAELAAVKSNFVGSIPSSLGLLSKISILRLPENHLSGNIPPEIGNCKSLRKLHLYSNQLGGAIPNELGGLSKLEDLELYSNSLTGEIPLTIWKIQNLKHVLLHNNSLSGKLPPEMTELKHLKNIALFDNQFSGPIPQNLGINSSLVKLDLMNNAFTGDIPPNLCFGKKLRTLNLGLNQLQGGILQDLGRCATLRRLVLNENNLSGSLPYFEGDQNLIYMDMSKNNMSGVIPSSLGNCTSLTALILSTNSITGLIPLELGNLVNLQALNLAHNNLEGPLPLQLSYCTKMLTFDVGFNFLNGSFPSSMRSWTGLTALFLRENHFSGDIPSFLSEYDQLLDLQLGGNMFVGKIPASIGSLQNLLYGLNLSSNKLAGEIPLEIGKLQKLLSLDISLNSLTGSIHVLGELSSLIEINISYNSFFGPLPEWKMKPLNLSSSSFFGNPGLCVHCSTSNRSSCINSGLLKPCNSESTEHKRSRRLILFIALGFVGFVIFLSEILLIYNHHSRQRSKEGGLTFADEQIYIHQMGQRSELKASVADYEVQEISYSNDEGDFRVIDLMNATENLHDQYIIGEGGHGTVYKAKLDNGVFAIKKIKFGQRNRRKLNMIKEVEMMRKIRHQNVARCLGSWIGEEYGLTISRYMENGSLHDVLHENDPLPYLAWNVRYKIAIGIAKGLAYLHHDCDPPILHRDIKPKNILLDSDMQPRITDFGISIALNQSSTTLNIRSTYHLGTRGFMAPEIACVIVPSCDLDIYSYGVVLLELITRKKVLDSSFMMEETTLVGWFKSVWRTTRELEEIVDSSIARELSDLNVMVQVIKVILVALICTETDPGKRLKMRDVVEFFETSTDPGIFVRHYGEFHLGSSLASAVASMFFQEARIPANRDYSSILREVMEAAASPNNLNIISRGTHGVVYKVHLGPDLVYAVKKLAFAGNKGKIQSIVRGIKILIKIRHRNLVELLDFLFTKDYGIILYSYIPNGNLHDVLHERNPPPSLGWTVRHRIAAGIAHGLAYLHYDCYPVILHRAIKTKNILLDYNMEPHIADFSIAKPLDQSSSKPSSSVPENTYTTANTRESDVYSFGIVLLELITRKKAVDPSFMEGVEIVGWVRTLWQETGGIYKIIDSSLSEEVSNPNVLKRIINVLLVALRCTEEDPEMRPTMRDVINQLKDAHI 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1006 1451 FunFam MDIS1-interacting receptor like kinase 2 isoform A 321 421 - -
Mibi04g1006 1451 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1256 1450 - -
Mibi04g1006 1451 Gene3D Ribonuclease Inhibitor 496 754 IPR032675 -
Mibi04g1006 1451 SUPERFAMILY L domain-like 494 726 - -
Mibi04g1006 1451 ProSiteProfiles Protein kinase domain profile. 845 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1006 1451 Pfam Protein kinase domain 847 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1006 1451 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Mibi04g1006 1451 ProSiteProfiles Protein kinase domain profile. 1179 1451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1006 1451 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 20 179 - -
Mibi04g1006 1451 SUPERFAMILY RNI-like 69 414 - -
Mibi04g1006 1451 SUPERFAMILY Protein kinase-like (PK-like) 833 1123 IPR011009 -
Mibi04g1006 1451 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 180 272 - -
Mibi04g1006 1451 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 921 1129 - -
Mibi04g1006 1451 Gene3D Transferase(Phosphotransferase) domain 1 1256 1451 - -
Mibi04g1006 1451 Gene3D Transferase(Phosphotransferase) domain 1 921 1129 - -
Mibi04g1006 1451 ProSitePatterns Protein kinases ATP-binding region signature. 851 873 IPR017441 GO:0005524
Mibi04g1006 1451 Gene3D Phosphorylase Kinase; domain 1 1155 1255 - -
Mibi04g1006 1451 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Mibi04g1006 1451 SUPERFAMILY Protein kinase-like (PK-like) 1173 1446 IPR011009 -
Mibi04g1006 1451 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 449 735 - -
Mibi04g1006 1451 Gene3D Ribonuclease Inhibitor 183 253 IPR032675 -
Mibi04g1006 1451 Pfam Leucine rich repeat 497 556 IPR001611 GO:0005515
Mibi04g1006 1451 Gene3D Ribonuclease Inhibitor 254 492 IPR032675 -
Mibi04g1006 1451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 966 978 IPR008271 GO:0004672|GO:0006468
Mibi04g1006 1451 Pfam Protein tyrosine and serine/threonine kinase 1184 1446 IPR001245 GO:0004672|GO:0006468
Mibi04g1006 1451 SUPERFAMILY L domain-like 417 513 - -
Mibi04g1006 1451 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 365 1121 - -
Mibi04g1006 1451 SMART serkin_6 1179 1447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1006 1451 SMART serkin_6 845 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1006 1451 Gene3D Phosphorylase Kinase; domain 1 825 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1006 Mibi-ChrMibi04 20546086 20551974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1006 1166 1449 Receptor kinase-like Gene Family AT1G73080 45.455 2.61e-76 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi04g1006 PK_Tyr_Ser-Thr 5e-28 CL0016