Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1005 ATGAAGCTCCTATTATTTGTCCTATGTTTGTTTGCTCTTTTCTATGTTACTTGTACCTTGAGTTTGGATGGGTTGACTCTATTATCACTTGTTAACCACTGGACTTCCGTGCCTGCTTCCTTAAATTCAAGCTGGAAGTCCTCTGATTCTACCCCTTGTTCATGGCCAGGGATACAATGCAACCGTTACAAAAACGTGGTCTTCCTAAACCTCACTGCTTCTCAGATTTTTGGTCACCTTGGGCCAGAAATTGGACAGTTGACTCACTTGCAGATACTTTTGATGGCCTCAAATGGTCTCTCGGGTACAATACCCCCAGAGTTAGGTAATTGTAGTCTGCTTGAGTATATTGATCTCTCCAATAATCATTTGTCAGGAAATATACCCCCAGAAATTGGTAACTGCAAATCTTTGAAGTCGTTCATTTTATATTCCAATCAACTTGAGGGAGCAATTCCAAAAGAACTGGGAAGTCTCAGAAAATTGGAGGACCTTGAATTGCATTTCAACCGTTTGACAGGTGAAATTCCACATGCAATTTGGAAGATTCAAAGTCTTAAGTATGTCCTTCTTCAGAATAATAGCCTTTCTGGGAAATTACCTCCAGAGATGACAGAGCTCAAGCATCTGAAAAATATCTCATTGTTTCACAACCAATTCTCTGGAACAATTCCTCAAAGCTTGGGAATCAATAGCAGTTTAGTGAAGCTGGACTTGATGAATAACAAGTTTATTGGTGACATCCCTCCAAATCTTTGTTTTGGAAGGCATCTAGGGACACTGAGTTTAGGTCTTAATCAGCTTCAAGGGGCCATACCTCAAGATTTGGGAAGATGTGCAAGTCTTGAAAGGTTGGTTCTCAATGGCAATAATCTTTCTGGGTCTATTCCGAATTTTGAAGGTAATAATAATCTCATATACATGGACATCAGCAAGAACTACATCAGTGGAGTAATTCCATCAAGTTTGGGAAACTGCTCAAATATCACTGGTTTATTTTTGTCTACAAATAACATTGAAGGGCATATACCCTCAGAGCTAGGAAACCTTTTGAACCTTCAGGTTTTGAATCTTTCTCACAACAGCCTAGAAGGTCCTTTGCCACTGCAGCTGTCATACTGTACCAAAATGTTGACATTTGATGTGGGATTCAATTTTCTTAGTGGTTCATTCCCATCAAGCATGAGGAGCTGGACAGGATTAACCACATTAGTTTTAATTGAGAATCGCTTTAGCGGGGATATCCCATCTTTCTTATCAGAATATGTCCAGCTTCTTGAGCTACAACTTGGAGGAAATATGTTTGTGGGGAAAATTCCTACATCAATTGGATCATTGCAGAATCTTTTATATGGTTTGAATCTGAGTTCTAATAAATTAGCTGGTAACATCCCTTTAGAAATTGGGAAGCTGCAAAAGCTGCAAAGCCTGGATTTATCCCTGAACAATTTGACAGGGAGCATACATGTTCTTGGTGAACTTTCTTCATTAATAGAAGTCAATGTATCACACAACTCATTCATAGGTCCTTTACCAGAATGGAATACACAACATCTGAATTTGTCTCCATCGTCATTCTTGGGTAATCCTGATCTGTGTGTTCATTGTCTCACCCCAGATGGCTTCAGTTGCAGAAAATATAGCATCTTGAAACCATGTGCCTCTGAGTCATCTGGCCACGATATCAGTACACGTTCAGCTTTATTTATAGCACTTGGATTTGTAGGGTATGTCATAGTCTTGTCAGGAATACTACTAATTTATGACCGCCATTCTGGCCAAATGTCACCGGAAGCCCCGCACTATAGCAAAAGAACTGAAGAGGAAGTCCTTACTCATTATAATAAGCAACATTTAATCCGTGAGTTTGGTGAAAGAGTCATGCTAGAGGGAACTTTTTTTGGTCAAGAGCCAGAGGCTTCATATTCAAGTGACAGAGGAGATTTCAGAATTACTGACCTGATAAATGCTACGGAGACTCTAGACGATCGGTATATCATCGGCGAAGGAGGGCATGGAATTGTTTATAGAGCCGAACTTGATGTTGGAGTTTTTGCTATCAAGAAGGTTAAATTTGGGGATAGCAATAGGAGGAAATTAAACATGATCAGAGAAGTTGAAATGACTAGGAAGATTAGGCATCAAAATGTGGCAAGTTCCCTAGGCTCCTGGATAGGCCAGGAATATGGTTTAATCATTAGCAGGTACATGGAAAATGGAAGTCTTCATGATGTTTTGCATGAAAATAACCCACTACCATACTTAGCTTGGAATGTCCGCTATAAGATTGCTGTTGGAATATCAAAAGGACTGGCATATCTCCATCATGACATTGATCCTCCTATATTGCATAGAGACATCAAACCAAAGAATATACTCCTTGACTCTGATATGCAGCCTTATATTACTGATTTTGGTATATCAATTGCTTTGAATCAGTCCTCTACTGTGGTGAATATGCGGTCAACATATCATCTAGGTACACATGGATTTATGGCTCCAGGTAGTTTGGTTCAGCCTGCAAGACTCATCAAAATAGCTGTTTTGCAAGGGGAAGTCAAGATCTCTGCCAATGAAGGTTCTTTCTCAGCTCTTCATGAAGTGGAGGCTACTGCTAACCCAAACAATCTCAAGATTATTCCCAGAGGAGCTCCTGGAGTTATTTGTAAAGTTAAAACATGTTCAGGCAAAATTTGTGCTGAAAAGAAGCTTACATTTTCTGGGAACTGGGGCAATATCTTAACTGCTGCAACTGAAGTTGAAATCCTTGGAAAGATTAGGCACCGAAATATAGTTGGAATGCTATGGTGTTCGATTAAAAATGACTACGGTTTAATCTGGTATGAGCACATGGTAAATGGAAACCTACATGATCTTTTTGTTGCCAAACATCGGAAATTTCTTGATGCATATCCTACAATGCCATCCTCATCTATAGTAGGCAGACTACTTAGACTAGGGTATATTACACTAGATTGGGGTTTGGGTCAGATGTCTGTGGAGGGAGACAGGAGACATTTTTAA 3024 0.3968 MKLLLFVLCLFALFYVTCTLSLDGLTLLSLVNHWTSVPASLNSSWKSSDSTPCSWPGIQCNRYKNVVFLNLTASQIFGHLGPEIGQLTHLQILLMASNGLSGTIPPELGNCSLLEYIDLSNNHLSGNIPPEIGNCKSLKSFILYSNQLEGAIPKELGSLRKLEDLELHFNRLTGEIPHAIWKIQSLKYVLLQNNSLSGKLPPEMTELKHLKNISLFHNQFSGTIPQSLGINSSLVKLDLMNNKFIGDIPPNLCFGRHLGTLSLGLNQLQGAIPQDLGRCASLERLVLNGNNLSGSIPNFEGNNNLIYMDISKNYISGVIPSSLGNCSNITGLFLSTNNIEGHIPSELGNLLNLQVLNLSHNSLEGPLPLQLSYCTKMLTFDVGFNFLSGSFPSSMRSWTGLTTLVLIENRFSGDIPSFLSEYVQLLELQLGGNMFVGKIPTSIGSLQNLLYGLNLSSNKLAGNIPLEIGKLQKLQSLDLSLNNLTGSIHVLGELSSLIEVNVSHNSFIGPLPEWNTQHLNLSPSSFLGNPDLCVHCLTPDGFSCRKYSILKPCASESSGHDISTRSALFIALGFVGYVIVLSGILLIYDRHSGQMSPEAPHYSKRTEEEVLTHYNKQHLIREFGERVMLEGTFFGQEPEASYSSDRGDFRITDLINATETLDDRYIIGEGGHGIVYRAELDVGVFAIKKVKFGDSNRRKLNMIREVEMTRKIRHQNVASSLGSWIGQEYGLIISRYMENGSLHDVLHENNPLPYLAWNVRYKIAVGISKGLAYLHHDIDPPILHRDIKPKNILLDSDMQPYITDFGISIALNQSSTVVNMRSTYHLGTHGFMAPGSLVQPARLIKIAVLQGEVKISANEGSFSALHEVEATANPNNLKIIPRGAPGVICKVKTCSGKICAEKKLTFSGNWGNILTAATEVEILGKIRHRNIVGMLWCSIKNDYGLIWYEHMVNGNLHDLFVAKHRKFLDAYPTMPSSSIVGRLLRLGYITLDWGLGQMSVEGDRRHF 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1005 1007 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 215 544 - -
Mibi04g1005 1007 Gene3D Transferase(Phosphotransferase) domain 1 649 843 - -
Mibi04g1005 1007 SUPERFAMILY L domain-like 250 536 - -
Mibi04g1005 1007 SMART LRR_typ_2 471 494 IPR003591 -
Mibi04g1005 1007 SMART LRR_typ_2 112 135 IPR003591 -
Mibi04g1005 1007 SMART LRR_typ_2 350 374 IPR003591 -
Mibi04g1005 1007 SMART LRR_typ_2 87 111 IPR003591 -
Mibi04g1005 1007 SMART LRR_typ_2 159 183 IPR003591 -
Mibi04g1005 1007 Gene3D Ribonuclease Inhibitor 187 254 IPR032675 -
Mibi04g1005 1007 ProSiteProfiles Protein kinase domain profile. 661 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1005 1007 ProSiteProfiles Leucine-rich repeat profile. 473 495 IPR001611 GO:0005515
Mibi04g1005 1007 SMART serkin_6 661 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1005 1007 Gene3D Transferase(Phosphotransferase) domain 1 856 979 - -
Mibi04g1005 1007 Pfam Leucine rich repeat 233 292 IPR001611 GO:0005515
Mibi04g1005 1007 Gene3D Ribonuclease Inhibitor 256 549 IPR032675 -
Mibi04g1005 1007 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 258 834 - -
Mibi04g1005 1007 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 178 - -
Mibi04g1005 1007 Gene3D Ribonuclease Inhibitor 23 186 IPR032675 -
Mibi04g1005 1007 FunFam Os07g0541700 protein 737 827 - -
Mibi04g1005 1007 Pfam Protein kinase domain 666 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1005 1007 SUPERFAMILY Protein kinase-like (PK-like) 644 837 IPR011009 -
Mibi04g1005 1007 ProSitePatterns Protein kinases ATP-binding region signature. 667 689 IPR017441 GO:0005524
Mibi04g1005 1007 SUPERFAMILY L domain-like 21 305 - -
Mibi04g1005 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Mibi04g1005 1007 SUPERFAMILY Protein kinase-like (PK-like) 861 967 IPR011009 -
Mibi04g1005 1007 PRINTS Leucine-rich repeat signature 114 127 - -
Mibi04g1005 1007 PRINTS Leucine-rich repeat signature 350 363 - -
Mibi04g1005 1007 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1005 Mibi-ChrMibi04 20531068 20536101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1005 855 969 Receptor kinase-like Gene Family AT1G73080 32.203 1.11e-10 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi04g1005 Pkinase 2.3e-30 CL0016