Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1003 ATGAAGCTCCTATTATTTATCCTAACCATGTCTGCTTCTTTCTATGTTACCTGTACCTTGAGTTTGGATGGGTTGACTTTATTATCACTTCTCAACCACTGGACTTCCGTGCCTCCTTCCTTAAATTCAACCTGGAAGTCCTCTGATCCTAACCCTTGTTCATGGCTAGGGATACAATGCAACCGTTACCAAAACGTGGTCTTCCTAAACCTCACTGCATCTCAGATTTTTGGTCACCTTGGACCAGAAATTGGACGGTTGACTCACTTACAGAAACTTATGTTGGCCTCAAATGGTTTCTCAGGTACAATACCGCCAGAGTTGGGTAATTGTAGTATGCTTGAGTATATTGATCTCTCTAATAATCATTTGTCAGGAAATATACCCCCAGAAATTGGTAATTGCAAATCTTTGAAGTCGTTCATTTTATATTCCAATCAACTTGAGGGAGTAATTCCAAAAGAATTGGGAAGTCTCAGAAAATTGGAGGACCTTGAATTGTACTTCAACCGTTTGACAGGTGAAATTCCACATGCAATTTGGAAGATTCAAAGTCTTAAGCATGTCCTTCTTCAGAATAATAGCCTTTCTGGGACATTACCTTCAGAGATGACAGAGCTCAAGCATCTGAAAAATATCTCATTGTTTGACAACCAATTCTCTGGAAAAATTCCTCAAAGCTTGGGAATCAATAGCAGTTTAGTGAAGCTGGACTTGATGAATAATAAGTTTACTGGTGACATCCCTCCAAATCTTTGTTTTGGAAAGCATCTAGGGACACTGAATTTAGGTCTTAATCAGCTTCAAGGGGCCATACCTCAAGATTTGGGAAGATGTGCAAGTCTTGTAAGGTTGGTTCTCAATGGCAATAATCTTTCTGGGTCTATTCCGAATTTTGAAGGTAATAATAATCTCATATACATGGATATCAGCAAGAACAACATCAGTGGGGCAATTCCATCAAGTTTGGGGAGCTGTTCAAATCTCATTGGTTTATTTTTGTCCACAAATAACATTACAGGGCATATACCCTCAGAGTTGGGAAACCTTTTGAACCTTCAGGTTTTGAATCTTGCCTACAATAACCTAGGAGGTACTTTGCCACTGCAACTGTCGAACTGTACCAAAATGTGGACATTTGATGTGGGATCCAATTCTCTTAATGGTTCATTCCCATCAAGCATGAGGAGCTGGTCAGGACTAGCCAGATTAATTTTAAGAGATAATCATTTTAACGGGCTTGCCCCTTTATTCTTCTTAGAGTATACCCAACTTCTTGAGTTACAACTTGGTGGAAATATGTTTGAAGGAGAAATTCCCACATCAATTGGATATTTGAGTCCATTATATGAGTTGAATCTGAGTTCCAATAAATTAACAGGTAAGATCCCTGTTACATTTAGTCTGTTGTCAATGCTTGAAAGCCTGGATTTATCTCGGAACAACTTTTCAGGAGACATACAATTCCTTGGTAGTCTTGTATCTTTAACAAATGTCAATTTATCATACAACTCATTTTCTGGTCCTTTACCTGAATGGGGAGCGCAACAGTTGGAATTATCTCCATTATCATTCTTGGGCAATCCTAGCCTTTGTGTCGATTGTTCAAATTTAGATCGCTCAAGTTGCATAAAATTTAGCCATTTGAAGTCATGTGACTCTAAATCAATTAACCACAAAGGCAATAAATCAATTGACCACAAAGGCAGTCAACTTACCAAACAACCAAAATTAATAGTATTGGGACTCATACTCTTTATCATTTGCCTCCCACCTGTAATTTACATCTCATATGTCATTTACATCCGCTGGTTTGTTCATGTATCTGATGTGGAGGTCAATGTGGATTATGAAGAGCAAGAGGATTTTTTTGAAGGACATTTTAGAATTTTTAACCTACTAGATGCTACAGAACAGCTACATGATCGATATATAATTGGTGAAGGAGGGCATGGGATTGTTTATAAAGCCAAACTTGATATTGGAGTTTTTGCCATTAAGAAGGTAAAATTTGCAAACAGCAAGAAGAGGAAACTAAACATAATCAAAGAAATTGAAATGACTAGGAAGATTAGGCATCAAAATGTGGCAAGAAGCCTAGGCTCCTGGATAGGTGAGGAATATGGTCTAATTGTCAGCAGATACATGGAAAATGGAAGCCTTCACGATGTTTTACATGACAAAAATCGACGAACTTGTCTAGCATGGAATGTCCGTTATAAAATTGCTATTGGAATTGCAAAAGGATTAGCACATCTCCATCATGATTGTGATCCCCCCATATTGCATCGAGACATCAAACCAAAGAATATACTCATTGATTCTGATATGCAACCTTATATTACCGATTTTGGTATTTCGATTGCTTTGAATACGCCCTCTTCTTCGGTGCATATTCGGTCAACATACCATCTTGGTACTCGTGGGTTTATGGCACCAGAGATTGCATGTGTGGTGGTGCCAAGCTGTGAGCTTGATGTATATAGTTTCGGGGTAGTTTTGCTTGAGCTGATAACCAGAAAGAAGGTATTGGATTCCTCGTTTGTGGAACAAGAAACCACTTTGGCAGGGTGGTTTAAATCTGTATGGAGAAGAACGAATGAACTTGAAGAAATTATTGATTCATCCCTTGGAAGGGAGCTTTCAGATTTAAATGTAAAGGTGCAAGTTATCAAAGTGCTTTTGGTGGCTCTAATTTGTACCGAAACAAATCCAGAAAAGAGACTGAAAATGAGAGATGTCATTGAATTCTTTGAAACACCCACCGATCCAGGTAGGAGTTCTGTTCAATTGACAAGGACAAGTGTCATTAACATCCATGAAGCCATACTTAAATTAAAAAGTATTGAATTCTACCACAAGACTGTGTGGATCCTTGTTCATATTTTTTCAGATTCTGGAATTTTCGTACAGCATGATGGAGCATTTCATTTAGGGAGTTCTCTTGCTACTGCTGTAGCCTCTATATTTTTTCAGTTTTCTATGCACCTATTTCCTATCTCCAAGGAGGAAGTCAAGATCACTGCCAGTAGAGGTTCTTTCCCAATTCTTCACGAGTTGATGAAGCATAAGGAAAAATTGAACAACCCAAGTATTATTGGCAGAGGAACTCATGGTGTTGTATATAAATTTTCAGTAGGGGCATCCCAGGTTTATGCTGTAAAGAAGGTTGCATCTGCTGGGAACAAAAGAACGATTGTAAGAATAGTTAGAGAAATTTCAATCATTGGAAAGATTAGGCATCGAAATATAGTCAGATTGCTGGACTTTTTGTTTGAAAAGGACAATTGTCTAATCTTGTACAATTACGTACCAAATGGAAATCTTCATGATGTTTTGCATGAAAAGAATCCACTGCCATGCCTAGGGTGGAATGCCCGATATAGGATAGCTGTTGGAATTGCTCATGGATTGGCTTTTCTCCATTATGATTGCCATCCTGCCATAGTCCACTGTGCCATCAAACCTAAAAATATACTCCTAGATTCTGATATGGATCCTTATATTGCTGATTTTGGCATTGCCAAGTTTTTGGACCAGTCTTCTGCAACACTATCTTTACCAGTTCCAGGCACACACGGGTATATAACATCAGAGAGTACATATACAACAGCAAATACCAAAGAGTTGGATGTCTACACTTTTCTGGTTAGACCTACACTCTGCCAGAATCTTGCAAGTTTTGATATTCACTTTATGCTTGGGTTCCATTATAATAAGCAAATCTAG 3729 0.3827 MKLLLFILTMSASFYVTCTLSLDGLTLLSLLNHWTSVPPSLNSTWKSSDPNPCSWLGIQCNRYQNVVFLNLTASQIFGHLGPEIGRLTHLQKLMLASNGFSGTIPPELGNCSMLEYIDLSNNHLSGNIPPEIGNCKSLKSFILYSNQLEGVIPKELGSLRKLEDLELYFNRLTGEIPHAIWKIQSLKHVLLQNNSLSGTLPSEMTELKHLKNISLFDNQFSGKIPQSLGINSSLVKLDLMNNKFTGDIPPNLCFGKHLGTLNLGLNQLQGAIPQDLGRCASLVRLVLNGNNLSGSIPNFEGNNNLIYMDISKNNISGAIPSSLGSCSNLIGLFLSTNNITGHIPSELGNLLNLQVLNLAYNNLGGTLPLQLSNCTKMWTFDVGSNSLNGSFPSSMRSWSGLARLILRDNHFNGLAPLFFLEYTQLLELQLGGNMFEGEIPTSIGYLSPLYELNLSSNKLTGKIPVTFSLLSMLESLDLSRNNFSGDIQFLGSLVSLTNVNLSYNSFSGPLPEWGAQQLELSPLSFLGNPSLCVDCSNLDRSSCIKFSHLKSCDSKSINHKGNKSIDHKGSQLTKQPKLIVLGLILFIICLPPVIYISYVIYIRWFVHVSDVEVNVDYEEQEDFFEGHFRIFNLLDATEQLHDRYIIGEGGHGIVYKAKLDIGVFAIKKVKFANSKKRKLNIIKEIEMTRKIRHQNVARSLGSWIGEEYGLIVSRYMENGSLHDVLHDKNRRTCLAWNVRYKIAIGIAKGLAHLHHDCDPPILHRDIKPKNILIDSDMQPYITDFGISIALNTPSSSVHIRSTYHLGTRGFMAPEIACVVVPSCELDVYSFGVVLLELITRKKVLDSSFVEQETTLAGWFKSVWRRTNELEEIIDSSLGRELSDLNVKVQVIKVLLVALICTETNPEKRLKMRDVIEFFETPTDPGRSSVQLTRTSVINIHEAILKLKSIEFYHKTVWILVHIFSDSGIFVQHDGAFHLGSSLATAVASIFFQFSMHLFPISKEEVKITASRGSFPILHELMKHKEKLNNPSIIGRGTHGVVYKFSVGASQVYAVKKVASAGNKRTIVRIVREISIIGKIRHRNIVRLLDFLFEKDNCLILYNYVPNGNLHDVLHEKNPLPCLGWNARYRIAVGIAHGLAFLHYDCHPAIVHCAIKPKNILLDSDMDPYIADFGIAKFLDQSSATLSLPVPGTHGYITSESTYTTANTKELDVYTFLVRPTLCQNLASFDIHFMLGFHYNKQI 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1003 1242 FunFam Leucine-rich repeat receptor-like protein kinase TDR 230 543 - -
Mibi04g1003 1242 SMART serkin_6 640 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1003 1242 SMART serkin_6 1027 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1003 1242 Gene3D Ribonuclease Inhibitor 205 542 IPR032675 -
Mibi04g1003 1242 ProSitePatterns Protein kinases ATP-binding region signature. 1033 1056 IPR017441 GO:0005524
Mibi04g1003 1242 ProSiteProfiles Protein kinase domain profile. 640 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1003 1242 FunFam Os07g0541700 protein 1104 1192 - -
Mibi04g1003 1242 Gene3D Transferase(Phosphotransferase) domain 1 1016 1217 - -
Mibi04g1003 1242 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672|GO:0006468
Mibi04g1003 1242 SUPERFAMILY L domain-like 249 546 - -
Mibi04g1003 1242 Pfam Protein kinase domain 644 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1003 1242 Pfam Protein kinase domain 1031 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1003 1242 Gene3D Ribonuclease Inhibitor 23 189 IPR032675 -
Mibi04g1003 1242 Gene3D Transferase(Phosphotransferase) domain 1 716 933 - -
Mibi04g1003 1242 FunFam MDIS1-interacting receptor like kinase 2 isoform A 129 227 - -
Mibi04g1003 1242 Gene3D Phosphorylase Kinase; domain 1 612 715 - -
Mibi04g1003 1242 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 716 924 - -
Mibi04g1003 1242 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Mibi04g1003 1242 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 152 916 - -
Mibi04g1003 1242 SMART LRR_typ_2 470 497 IPR003591 -
Mibi04g1003 1242 SMART LRR_typ_2 159 183 IPR003591 -
Mibi04g1003 1242 SMART LRR_typ_2 112 135 IPR003591 -
Mibi04g1003 1242 SMART LRR_typ_2 87 111 IPR003591 -
Mibi04g1003 1242 SMART LRR_typ_2 350 374 IPR003591 -
Mibi04g1003 1242 SUPERFAMILY L domain-like 21 304 - -
Mibi04g1003 1242 FunFam Leucine-rich repeat receptor-like kinase 25 128 - -
Mibi04g1003 1242 SUPERFAMILY Protein kinase-like (PK-like) 1013 1215 IPR011009 -
Mibi04g1003 1242 SUPERFAMILY Protein kinase-like (PK-like) 627 917 IPR011009 -
Mibi04g1003 1242 ProSitePatterns Protein kinases ATP-binding region signature. 646 668 IPR017441 GO:0005524
Mibi04g1003 1242 ProSiteProfiles Protein kinase domain profile. 1027 1242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1003 1242 Pfam Leucine rich repeat 424 483 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1003 Mibi-ChrMibi04 20488082 20495016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1003 64 916 Receptor kinase-like Gene Family AT1G17750 44.070 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi04g1003 Pkinase 1.7e-41 CL0016