Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0997 ATGAAGCATCTCTGTGTGGTGCTTCTTCTTCTTCCTCTATTATGCTTTTCTTCATTGTTTTGGTCTGTTTCTTCTTTGAGCTCTGATGGGGTGACCCTATTATCACTATTGAGGCACTGGACTTCTGTACCTCAACCTATAAAATCCACCTGGAATCACACAGATTCCACTCCTTGTTCTTGGGTTGGAATCCAGTGTGACCATGCCAACAATGTTATCTCCCTAAACCTCACTGAGTATGGGATTGAGGGTCAAATAGGACCTGAGATTGGACTTTTAAGTCACTTGCAGAACCTTGTATTGATAAATAATGGTTTCTCTGGAAAAATTCCTCCTGAGTTAGGGAATTGTAGTATGCTAGAGGATTTAGAACTTTCTGGAAACAACTTTAGTGGAGAAATTCCCATGAACTTCAAAAACTTGCAGAATTTGATGTATATTGACCTTTCTTCTAATCAGCTCACTAGCCAAATCCCAGAATTCTTCACTCAAATCCCTCACTTGCAATCTGTTTACTTGTCTGATAACAATCTCAATGGTTCAATCCCTTCTGCTATAGGAAACATGAGTGAGCTTATGTTCCTATATCTACAAAATAATAAGTTGTCTGGTGAAATTCCTTCCTCAATAGGGAATTGTAGTAAACTGCAAGAGTTGGTCTTGAGTAATAATCAGCTTCAGGGAAATCTTCCAGAGACTCTAAATAATCTCCATGATATTACTTATTTGAACTTTGCTTATAATGATCTTAGGGGTACTATTCCATTGGGTACTGGCAGTTGTGAAAATTTGTCTTTCTTGGATCTGTCATACAACGTATTCAGTGGAGGTATTCCTTCAAGCTTAGGAAATTGTACTGTCTTAACAACATTTTCTGCTGTTAGCAGTGGCTTAACCGGTATCATTCCATCCTCCATCGGTCTGCTTCGCAAGCTTTCCCTTTTATATCTTCCTTTGAATCATTTGTCCGGAAAAATACCTCCTGAGATCGGCAATTGTAAGTCTTTGACTGAGTTGCATCTGTATTCCAATCAACTTGAGGGAGAAATTCCTAGTGAGCTGGGAGAGTTGAGTGAATTACAGGATCTTGAGTTGTTCTCTAACCATTTGACCGGTGAAATTCCTCTCAGCATCTGGAAGATTCAAAGCCTTGAGTATATCCATGTGTACAATAATAGCCTCTCCGGGGAGCTACCTTTGGAGATGGCAAAGCTCAAGAATCTGAAGAATATCTCATTGTTCAACAACCACTTCTCTGGAGTCATACCTCAAACTTTGGGAATCAAAAGCAGTTTATTACAGTTGGACTTTATGAATAATAAGTTCACTGGTAACATCCCACCAAATCTTTGTTATGGGAAGAAATTAGTTAAGCTGATTTTGGGCCTTAATCAGCTTCAAGGCAGCATACCTCCAGATGTAGGAAGTTGTACAACTCTCAAAAGGTTGATTCTTGAGGAAAATATTTTGACAGGGCCCTTACCGGATTTTCAATATAATCCGAATCTCACGTTCATGGATATCAGTGGGAACAATATCAGTGGCTCAATCCCACCAAGCTTGGGAAACTGCTCAAATGCCACTGATTTAATTTTGTCAAATAACAACTTTGTGGGTCGTATACCGCCCGAGATAGGTTACCTTGCAAACCTGAAGACTCTGCATCTTGATCACAACCATTTGGAAGGTCCTTTGCCCCCTGAGCTGTCAAAATGTACTAGAATGGACAGTTTTGATGTGGGATTTAATTTCCTGAATGGTTCATTTCCACCAAGTTTTAGGAGCTGGAAGGTGCTAACAACATTAAATCTAAGAGAGAATCGTTTTCATGGAGGCATCCCGGATTTCTTGTCAGAATTCAACATGCTCTCTGAGCTTCATCTTGGTGGAAATATGCTTGGAGGAAGAATTCCAGGATCCATTGGGGCGCTGCAGAATCTGCGCTACGGGTTGAATCTAAGTGCTAATGGACTGATTGGTGAAATTCCTCGTGAGATGGGAAAATTAACGGAGCTGATAAGTTTGGATCTGTCTCAAAACAACTTGACCGGAAGCATAGGAGTTCTTGCGGAGCTTTCTTCTTCGTTACTTAAACTCAATGTTTCATACAATTCCTTTGATGGGCCAGTACCGAAGACACTGATGAAGCTGCTCAATTTTGATCCTTCATCGTTTTCAGGAAATCCGAGCCTGTGTGTCAGTTGTTCATCATCAAACAGATTGGATTGCAATCATACTAGCTTTCTCAAGCCATGTGATGATATATTGGCAAACCATAAAGGGCTAAGTAAAGTACAAGTAGCAATGATAGCACTTGGATCATCAATATTTTTTGTTCTTTCGCTGCTGGGAATAGTCTATATCTGTGTATGCGGCAGAAATTCTAAGCAGGAAGTGGATATCTCTGCCAAAGAAGGCCCTTCCTTACTTCTTAACAAAGTGATGAATGCTACCGCTAACCTAAGTGACCGGTTTATTATCGGTAGAGGAGCTCATGGAGTAGTTTACAAAGCTTCAGTGGATCCAGGCAAAGTTTATGCTGTGAAGAAGCTTGCATTTTCTGGGAACAAAAACAAGAGCATGCATAGAGAAATCCAAACCCTTGGAAAGATTAGGCACCGAAATCTAGTCAAATTGGAAGACTTTTGGATGAGAAAAGACTTTGGTCTGATCTTGTACACATACATGCCAAATGGGAGCCTGCATGATGTCTTGCACCGAAATCATCCACCGTTATCTTTAGAGTGGAATGTTCGATATAAGATAGCCATTGGCATTGCTCATGGACTTGCCTATCTCCATTATGATTGTGATCCTCCCATAATACACCGTGACATCAAACCAAAAAACATACTCCTAGATTCTGATATGGAGCCTCACATTGCTGATTTTGGTATCGCCAAGCTTTTGGATCAATCTTCTATTTCAGCACCATCTATATCTGTCCCTGGCACAGTAGGGTATATTGCACCAGAGAACGCATATACAACAGCGAATAATAGAGAATCCGATGTATACAGCTATGGGGTAGTGTTGCTTGAGTTGATAACCAGAAAGATGGCAGTGGATCCATCATTTATGGAGGGAGTTGATATAGTGAGCTGGGTCAGAACGTTATGGAGTGGAACAGAAGATGTTCATAAAATTGCTGATTCAAGTCCTGTAGGACAGTTTCTGGATTCAAATGTTCTTGAACAAACTACCAAAGTGCTTTTGGTGGCTCTGAAATGCACAGAGAAGGATCCACGAGTGAGACCAACAATGCGAGATGTTATCAAGCAATTAGAAGATGCTAATCCAAGGACAAGGAGTAAAAAGATTCCAAGTTCCAATTCCTTAATCCGTGGTTAA 3351 0.4047 MKHLCVVLLLLPLLCFSSLFWSVSSLSSDGVTLLSLLRHWTSVPQPIKSTWNHTDSTPCSWVGIQCDHANNVISLNLTEYGIEGQIGPEIGLLSHLQNLVLINNGFSGKIPPELGNCSMLEDLELSGNNFSGEIPMNFKNLQNLMYIDLSSNQLTSQIPEFFTQIPHLQSVYLSDNNLNGSIPSAIGNMSELMFLYLQNNKLSGEIPSSIGNCSKLQELVLSNNQLQGNLPETLNNLHDITYLNFAYNDLRGTIPLGTGSCENLSFLDLSYNVFSGGIPSSLGNCTVLTTFSAVSSGLTGIIPSSIGLLRKLSLLYLPLNHLSGKIPPEIGNCKSLTELHLYSNQLEGEIPSELGELSELQDLELFSNHLTGEIPLSIWKIQSLEYIHVYNNSLSGELPLEMAKLKNLKNISLFNNHFSGVIPQTLGIKSSLLQLDFMNNKFTGNIPPNLCYGKKLVKLILGLNQLQGSIPPDVGSCTTLKRLILEENILTGPLPDFQYNPNLTFMDISGNNISGSIPPSLGNCSNATDLILSNNNFVGRIPPEIGYLANLKTLHLDHNHLEGPLPPELSKCTRMDSFDVGFNFLNGSFPPSFRSWKVLTTLNLRENRFHGGIPDFLSEFNMLSELHLGGNMLGGRIPGSIGALQNLRYGLNLSANGLIGEIPREMGKLTELISLDLSQNNLTGSIGVLAELSSSLLKLNVSYNSFDGPVPKTLMKLLNFDPSSFSGNPSLCVSCSSSNRLDCNHTSFLKPCDDILANHKGLSKVQVAMIALGSSIFFVLSLLGIVYICVCGRNSKQEVDISAKEGPSLLLNKVMNATANLSDRFIIGRGAHGVVYKASVDPGKVYAVKKLAFSGNKNKSMHREIQTLGKIRHRNLVKLEDFWMRKDFGLILYTYMPNGSLHDVLHRNHPPLSLEWNVRYKIAIGIAHGLAYLHYDCDPPIIHRDIKPKNILLDSDMEPHIADFGIAKLLDQSSISAPSISVPGTVGYIAPENAYTTANNRESDVYSYGVVLLELITRKMAVDPSFMEGVDIVSWVRTLWSGTEDVHKIADSSPVGQFLDSNVLEQTTKVLLVALKCTEKDPRVRPTMRDVIKQLEDANPRTRSKKIPSSNSLIRG 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0997 1116 ProSiteProfiles Protein kinase domain profile. 821 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0997 1116 SMART LRR_typ_2 548 572 IPR003591 -
Mibi04g0997 1116 SMART LRR_typ_2 309 333 IPR003591 -
Mibi04g0997 1116 SMART LRR_typ_2 165 188 IPR003591 -
Mibi04g0997 1116 SMART LRR_typ_2 669 699 IPR003591 -
Mibi04g0997 1116 SMART LRR_typ_2 334 357 IPR003591 -
Mibi04g0997 1116 SMART LRR_typ_2 189 213 IPR003591 -
Mibi04g0997 1116 SMART LRR_typ_2 141 164 IPR003591 -
Mibi04g0997 1116 SMART LRR_typ_2 93 117 IPR003591 -
Mibi04g0997 1116 Gene3D Phosphorylase Kinase; domain 1 788 895 - -
Mibi04g0997 1116 Pfam Leucine Rich Repeat 550 572 IPR001611 GO:0005515
Mibi04g0997 1116 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 788 895 - -
Mibi04g0997 1116 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 353 1096 - -
Mibi04g0997 1116 SUPERFAMILY Protein kinase-like (PK-like) 808 1095 IPR011009 -
Mibi04g0997 1116 ProSiteProfiles Leucine-rich repeat profile. 671 693 IPR001611 GO:0005515
Mibi04g0997 1116 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Mibi04g0997 1116 SUPERFAMILY L domain-like 454 711 - -
Mibi04g0997 1116 Pfam Leucine rich repeat 143 202 IPR001611 GO:0005515
Mibi04g0997 1116 Gene3D Transferase(Phosphotransferase) domain 1 896 1112 - -
Mibi04g0997 1116 SUPERFAMILY L domain-like 28 291 - -
Mibi04g0997 1116 FunFam Predicted protein 301 400 - -
Mibi04g0997 1116 Pfam Protein kinase domain 826 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0997 1116 Gene3D Ribonuclease Inhibitor 432 742 IPR032675 -
Mibi04g0997 1116 Gene3D Ribonuclease Inhibitor 191 353 IPR032675 -
Mibi04g0997 1116 SUPERFAMILY RNI-like 229 538 - -
Mibi04g0997 1116 ProSitePatterns Protein kinases ATP-binding region signature. 827 850 IPR017441 GO:0005524
Mibi04g0997 1116 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 25 183 - -
Mibi04g0997 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 941 953 IPR008271 GO:0004672|GO:0006468
Mibi04g0997 1116 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 454 741 - -
Mibi04g0997 1116 Gene3D Ribonuclease Inhibitor 354 431 IPR032675 -
Mibi04g0997 1116 FunFam Serine/threonine-protein kinase-like protein CCR4 896 1113 - -
Mibi04g0997 1116 SMART serkin_6 821 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0997 1116 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 184 278 - -
Mibi04g0997 1116 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0997 Mibi-ChrMibi04 20393855 20397694 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0997 22 1104 Receptor kinase-like Gene Family AT1G73080 53.776 0.0 1071
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi04g0997 Pkinase 1.7e-44 CL0016