Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0988 ATGTATTTGTACTTTATTTTTCACAGCCTTTCACTCCTTACTGATACACACCATCTTCATCTCCAAAACACATTACCTACCTCTCTCCCTCTCCCTCTCTCTCCACTCCATTTCCTCAATTCTCCAATGGCTACCACAGAAATCTCCAAACCCACCAATGAATTCATCTTCAAATCCAAACTTCCTGACATCTACATCCCAAAACACCTTCCCCTCCATTCCTACTGCTTCGAAAACCTCTCCGAATTCGGCTCCCGGCCATGTCTAATCAATGCCCCCACCGGCGAAATCTACACTTACTCCGACGTCGAGCTCACCGCCCGTCGAGTCGCCGCCGGTTTAAACAAATTCGGCATCCAACAAGGCGACGTCATCATGGTCCTCCTCCCCAACTCCCCCGAATTCGTCTTCTCCTTCCTCGGCGCCTCATTCCGCGGCGCCATCACCACGGCCGCCAACCCCTTCTTCACCGCGCCCGAGGTCGCCAAGCAGGCCAAGGCCTCGGGCGCGAAGCTGGTTGTAACTCAGTCCTTATACTTTGACAAAGTCAAAGACCTCTCCGGCGTGAAATTGATCTTCATCGATTCCCCGCCGGAGGGTCATTCACATTTTTCGGAGCTTGTTCAAGTCGATGAGGCCGAACTCCCCGACGTCGAGATCAAACCAAACGACGTCGTGGCCTTGCCGTACTCCTCCGGCACCACAGGGTTGCCTAAAGGTGTGATGTTGACACATAAGGGTTTGGTTACGAGTATAGCTCAACAAGTTGATGGGGAGAATCCGAATTTGTATTTTCATCATGAGGATGTGATTCTATGTGTGCTTCCTTTGTTTCATATTTACTCGTTGAATTCTGTATTGCTGTGTGGATTGAGGGCCAAGGCTGCGATCATGTTGATGCCTAAGTTTGAGATCAATGCCTTGTTGGGGTTGATTGAGAGGTACAAGGTTTCGATCGCGCCGGTTGTCCCGCCGATCGTTTTGGCGATCTCAAAGTCGAAGGAGACTGATAGACACGACCTGTCGTCGATCAGAGCGTTGAAGTCCGGTGGGGCTCCTTTGGGGAAGGAACTTGAGGACTCTGTTAGAGCCAAGTTCCCTAAAGCCAGACTTGGTCAGGGCTATGGGATGACTGAAGCAGGACCAGTGTTGACAATGAGCTTAGCATTTGCAAAGGAACCAATGGAAGTGAAACCAGGAGCATGTGGAACTGTGGTGAGAAATGCAGAAATGAAGATTGTGGACCCTGAGACCTCTGAATCGTTGCCTCGTAATCATCCCGGGGAGATCTGTATTAGAGGCGATCAAATTATGAAAGGCTATTTGAATGATCCGGAGGCAACAAAGAGAACCATAGACGAGGAGGGATGGTTACATACGGGAGACATAGGCTACATCGATGAGGACGATGAGCTGTTCATCGTTGATAGGCTGAAGGAGCTGATCAAGTACAAGGGATTCCAGGTGGCCCCCGCTGAACTTGAGGCCCTACTTCTCACTCATCCTCACATATCCGACGCTGCCGTGGTCCCGATGAAGGATGAAGCAGCTGGAGAAGTGCCGGTTGCTTTTGTGGTCAGATCCAACGGTTACACTGAAACCACCGAGGATGACATCAAACAGTTTATCTCCAAACAGGTGGTGTTTTACAAGAGACTAAGCAAAGTGTTCTTCATTGATGCAATTCCAAAGTCACCATCAGGCAAGATTTTAAGAAAGGATCTGAGAGCGAAACTAGCTACTACTAATAACTGA 1755 0.4946 MYLYFIFHSLSLLTDTHHLHLQNTLPTSLPLPLSPLHFLNSPMATTEISKPTNEFIFKSKLPDIYIPKHLPLHSYCFENLSEFGSRPCLINAPTGEIYTYSDVELTARRVAAGLNKFGIQQGDVIMVLLPNSPEFVFSFLGASFRGAITTAANPFFTAPEVAKQAKASGAKLVVTQSLYFDKVKDLSGVKLIFIDSPPEGHSHFSELVQVDEAELPDVEIKPNDVVALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGENPNLYFHHEDVILCVLPLFHIYSLNSVLLCGLRAKAAIMLMPKFEINALLGLIERYKVSIAPVVPPIVLAISKSKETDRHDLSSIRALKSGGAPLGKELEDSVRAKFPKARLGQGYGMTEAGPVLTMSLAFAKEPMEVKPGACGTVVRNAEMKIVDPETSESLPRNHPGEICIRGDQIMKGYLNDPEATKRTIDEEGWLHTGDIGYIDEDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPHISDAAVVPMKDEAAGEVPVAFVVRSNGYTETTEDDIKQFISKQVVFYKRLSKVFFIDAIPKSPSGKILRKDLRAKLATTNN 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0988 584 ProSitePatterns Putative AMP-binding domain signature. 228 239 IPR020845 -
Mibi04g0988 584 SUPERFAMILY Acetyl-CoA synthetase-like 40 580 - -
Mibi04g0988 584 FunFam 4-coumarate--CoA ligase 2 480 582 - -
Mibi04g0988 584 Gene3D - 479 582 IPR045851 -
Mibi04g0988 584 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 53 577 - -
Mibi04g0988 584 Gene3D - 50 478 IPR042099 -
Mibi04g0988 584 Pfam AMP-binding enzyme C-terminal domain 493 569 IPR025110 -
Mibi04g0988 584 FunFam Long-chain-fatty-acid--CoA ligase FadD 58 479 - -
Mibi04g0988 584 Pfam AMP-binding enzyme 80 484 IPR000873 -
Mibi04g0988 584 CDD 4CL 66 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0988 Mibi-ChrMibi04 20190134 20196564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0988 52 547 Monolignol Biosynthesis Gene Families AT1G51680 71.203 0.0 726