Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0986 ATGGCTCAAGAAGACTTTCTCTCTGATCTTCTCTGTGAATTGTTCTTCTTTTCTTCTTTCTTCTTTTGCTTTGTGGCCACTGAACTTCTCTGCATTGAATACCCATTTATCTCTTCTCTTTTTTTCCAACAACAACAAGAAGATCATCATCAATCTGTTACTCTCTCTGTGTCTGAAAACCCTCATCGCTCTCTATTTCCCAAGTTCATCTTACCCTCCTTACTTTCTTCCCTCCTTTCACGATCATCACCATCATCTTCCTATGCTTCTGCGTCTTCTTCTTGGTGTAACCAAGAAACTAAGGATGTGAAGTCTTTGATTAAACCAGAGAAACCCTTGGAAGTTATCTGTGAAATCTGTGCAGAAACTAAACGAATTACAGAGATGGTCAAGAACAAGACATGCGACCATTCTTATTGCTCTGATTGTATGATAAAACATGTGGCAACAAAAATCCAAGACACCATAACAGGAGTTCGTTGTCCCGGTTTGGATTGTGAAACTGTTTATGAGCTTGAAGATTGTCGGCCATGGCTTCCTAAGGACTTAATTGAAAGGTGGGATAAGGCTCTCTGTGAAGCTTTGTTTCTGCAAGTACCTAAAATTTACTGTCCATTTAATGATTGTTCAGTGATGATGTTGGTTGAGAATGAGATAGCCGAAGAATATGCAGGGGAAACAGAGTGTCCTGTTTGCCATAGAATGTTCTGTGCAAGGTGTAAGGTTCCTTGGCATCCTGGAGTTGACTGTGAGGAATATCAGAAGCTGAATGAGAATGAGAGACAGAGAGATGATCTTCTTGTGAGAAAGCTTGCTAAAGAGAAGAAATGGGGAAGGTGTCCAAAGTGTAAGTTTTTTGTGGAGAAGATCATAGGATGCTTGCATATCACTTGCAGGTGCAAATATCAGTTTTGTTATGCCTGTGGAAAAGAATGGTCTTCTGGTCATGGAGGATGCCAAAGAAATTAG 969 0.4025 MAQEDFLSDLLCELFFFSSFFFCFVATELLCIEYPFISSLFFQQQQEDHHQSVTLSVSENPHRSLFPKFILPSLLSSLLSRSSPSSSYASASSSWCNQETKDVKSLIKPEKPLEVICEICAETKRITEMVKNKTCDHSYCSDCMIKHVATKIQDTITGVRCPGLDCETVYELEDCRPWLPKDLIERWDKALCEALFLQVPKIYCPFNDCSVMMLVENEIAEEYAGETECPVCHRMFCARCKVPWHPGVDCEEYQKLNENERQRDDLLVRKLAKEKKWGRCPKCKFFVEKIIGCLHITCRCKYQFCYACGKEWSSGHGGCQRN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0986 322 SUPERFAMILY RING/U-box 261 320 - -
Mibi04g0986 322 SUPERFAMILY RING/U-box 115 194 - -
Mibi04g0986 322 SUPERFAMILY RING/U-box 188 255 - -
Mibi04g0986 322 ProSitePatterns Zinc finger RING-type signature. 135 144 IPR017907 -
Mibi04g0986 322 Pfam IBR domain, a half RING-finger domain 189 250 IPR002867 -
Mibi04g0986 322 Pfam IBR domain, a half RING-finger domain 269 319 IPR002867 -
Mibi04g0986 322 ProSiteProfiles Zinc finger RING-type profile. 117 162 IPR001841 -
Mibi04g0986 322 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 59 319 IPR031127 GO:0004842|GO:0016567
Mibi04g0986 322 Pfam Zinc finger, C3HC4 type (RING finger) 117 162 IPR018957 GO:0046872
Mibi04g0986 322 SMART ibrneu5 260 319 IPR002867 -
Mibi04g0986 322 SMART ibrneu5 185 250 IPR002867 -
Mibi04g0986 322 Gene3D - 246 322 - -
Mibi04g0986 322 ProSiteProfiles TRIAD supradomain profile. 113 322 IPR044066 -
Mibi04g0986 322 FunFam RBR-type E3 ubiquitin transferase 252 322 - -
Mibi04g0986 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 195 IPR013083 -
Mibi04g0986 322 FunFam RBR-type E3 ubiquitin transferase 113 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0986 Mibi-ChrMibi04 20170563 20172835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0986 117 309 C3H Transcription Factor Family AT2G19610 29.703 7.35e-20 87.8