Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi04g0986 | ATGGCTCAAGAAGACTTTCTCTCTGATCTTCTCTGTGAATTGTTCTTCTTTTCTTCTTTCTTCTTTTGCTTTGTGGCCACTGAACTTCTCTGCATTGAATACCCATTTATCTCTTCTCTTTTTTTCCAACAACAACAAGAAGATCATCATCAATCTGTTACTCTCTCTGTGTCTGAAAACCCTCATCGCTCTCTATTTCCCAAGTTCATCTTACCCTCCTTACTTTCTTCCCTCCTTTCACGATCATCACCATCATCTTCCTATGCTTCTGCGTCTTCTTCTTGGTGTAACCAAGAAACTAAGGATGTGAAGTCTTTGATTAAACCAGAGAAACCCTTGGAAGTTATCTGTGAAATCTGTGCAGAAACTAAACGAATTACAGAGATGGTCAAGAACAAGACATGCGACCATTCTTATTGCTCTGATTGTATGATAAAACATGTGGCAACAAAAATCCAAGACACCATAACAGGAGTTCGTTGTCCCGGTTTGGATTGTGAAACTGTTTATGAGCTTGAAGATTGTCGGCCATGGCTTCCTAAGGACTTAATTGAAAGGTGGGATAAGGCTCTCTGTGAAGCTTTGTTTCTGCAAGTACCTAAAATTTACTGTCCATTTAATGATTGTTCAGTGATGATGTTGGTTGAGAATGAGATAGCCGAAGAATATGCAGGGGAAACAGAGTGTCCTGTTTGCCATAGAATGTTCTGTGCAAGGTGTAAGGTTCCTTGGCATCCTGGAGTTGACTGTGAGGAATATCAGAAGCTGAATGAGAATGAGAGACAGAGAGATGATCTTCTTGTGAGAAAGCTTGCTAAAGAGAAGAAATGGGGAAGGTGTCCAAAGTGTAAGTTTTTTGTGGAGAAGATCATAGGATGCTTGCATATCACTTGCAGGTGCAAATATCAGTTTTGTTATGCCTGTGGAAAAGAATGGTCTTCTGGTCATGGAGGATGCCAAAGAAATTAG | 969 | 0.4025 | MAQEDFLSDLLCELFFFSSFFFCFVATELLCIEYPFISSLFFQQQQEDHHQSVTLSVSENPHRSLFPKFILPSLLSSLLSRSSPSSSYASASSSWCNQETKDVKSLIKPEKPLEVICEICAETKRITEMVKNKTCDHSYCSDCMIKHVATKIQDTITGVRCPGLDCETVYELEDCRPWLPKDLIERWDKALCEALFLQVPKIYCPFNDCSVMMLVENEIAEEYAGETECPVCHRMFCARCKVPWHPGVDCEEYQKLNENERQRDDLLVRKLAKEKKWGRCPKCKFFVEKIIGCLHITCRCKYQFCYACGKEWSSGHGGCQRN | 322 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi04g0986 | 322 | SUPERFAMILY | RING/U-box | 261 | 320 | - | - | |
Mibi04g0986 | 322 | SUPERFAMILY | RING/U-box | 115 | 194 | - | - | |
Mibi04g0986 | 322 | SUPERFAMILY | RING/U-box | 188 | 255 | - | - | |
Mibi04g0986 | 322 | ProSitePatterns | Zinc finger RING-type signature. | 135 | 144 | IPR017907 | - | |
Mibi04g0986 | 322 | Pfam | IBR domain, a half RING-finger domain | 189 | 250 | IPR002867 | - | |
Mibi04g0986 | 322 | Pfam | IBR domain, a half RING-finger domain | 269 | 319 | IPR002867 | - | |
Mibi04g0986 | 322 | ProSiteProfiles | Zinc finger RING-type profile. | 117 | 162 | IPR001841 | - | |
Mibi04g0986 | 322 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 59 | 319 | IPR031127 | GO:0004842|GO:0016567 | |
Mibi04g0986 | 322 | Pfam | Zinc finger, C3HC4 type (RING finger) | 117 | 162 | IPR018957 | GO:0046872 | |
Mibi04g0986 | 322 | SMART | ibrneu5 | 260 | 319 | IPR002867 | - | |
Mibi04g0986 | 322 | SMART | ibrneu5 | 185 | 250 | IPR002867 | - | |
Mibi04g0986 | 322 | Gene3D | - | 246 | 322 | - | - | |
Mibi04g0986 | 322 | ProSiteProfiles | TRIAD supradomain profile. | 113 | 322 | IPR044066 | - | |
Mibi04g0986 | 322 | FunFam | RBR-type E3 ubiquitin transferase | 252 | 322 | - | - | |
Mibi04g0986 | 322 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 113 | 195 | IPR013083 | - | |
Mibi04g0986 | 322 | FunFam | RBR-type E3 ubiquitin transferase | 113 | 198 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi04g0986 | Mibi-ChrMibi04 | 20170563 | 20172835 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi04g0986 | 117 | 309 | C3H Transcription Factor Family | AT2G19610 | 29.703 | 7.35e-20 | 87.8 |