Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0983 ATGCGTTTTCGGCTCAATATTTTCAACGCTCTCTGTTTCCGAAGTTCATCCAACAATCCTCCACAGAAAAACAATTCTTCCTCTAATTCTAACCCAGAAACTAAGTATGTGAACCCCACAATTGAAACATATGAGCTCTTGGAAGGAATCATCTGTGAAATATGTGCAGAAACTAAAGGAACTACCCAGATGATCAAGAACAATACATGTGACCATTCATATTGTTCTTATTGTATGACAAAACATGTCGCCACCAAAATCCAAGACAACATAACAGTAATTCCTTGTCCTGGTTTGGATTGTAAAACTGTTTATGAGATGGAAGCTTGTCGGCCATGGCTTCCCAAGGACTTACTTGAAAGGTGGGATAAAGCTCTATGTGAAGCTCTTTTTCTGCAGGTTCCTAAATTTTACTGTCCATTTAAGGATTGTTCAGTGATGATGGTGGTTGAGAATGAGGAAGATGAACAATATGCAGGGGAAACACGGTGCCCTGCTTGCCATAGAATGTTCTGTCCAAAGTGCAAGGTTCCATGGCATCCTGGAGTTAATTGTGAGGAATATCATAAACTGAAAGAAAATGAGAGACAGAGAGAAGATCTTCTTCTGAGAAAGCTTGCTAAAGACAAGAAATGGGGAAGGTGCCCCAAATGTAAGTTCTATGTGGAGAAGACATCTGGATGTTCTCATATTTCTTGTAGGTGTAAATATCAGTTTTGTTATAAATGTGGAGAAGGGATGACTCGTGTTTCTCATGGAGGCTGGCACTGCCGTTGCTTAAGATAG 786 0.4008 MRFRLNIFNALCFRSSSNNPPQKNNSSSNSNPETKYVNPTIETYELLEGIICEICAETKGTTQMIKNNTCDHSYCSYCMTKHVATKIQDNITVIPCPGLDCKTVYEMEACRPWLPKDLLERWDKALCEALFLQVPKFYCPFKDCSVMMVVENEEDEQYAGETRCPACHRMFCPKCKVPWHPGVNCEEYHKLKENERQREDLLLRKLAKDKKWGRCPKCKFYVEKTSGCSHISCRCKYQFCYKCGEGMTRVSHGGWHCRCLR 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0983 261 SUPERFAMILY RING/U-box 50 129 - -
Mibi04g0983 261 SUPERFAMILY RING/U-box 124 190 - -
Mibi04g0983 261 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 24 251 IPR031127 GO:0004842|GO:0016567
Mibi04g0983 261 MobiDBLite consensus disorder prediction 17 36 - -
Mibi04g0983 261 FunFam RBR-type E3 ubiquitin transferase 48 133 - -
Mibi04g0983 261 ProSitePatterns Zinc finger RING-type signature. 70 79 IPR017907 -
Mibi04g0983 261 SUPERFAMILY RING/U-box 196 258 - -
Mibi04g0983 261 ProSiteProfiles Zinc finger RING-type profile. 52 97 IPR001841 -
Mibi04g0983 261 ProSiteProfiles TRIAD supradomain profile. 48 261 IPR044066 -
Mibi04g0983 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 130 IPR013083 -
Mibi04g0983 261 Pfam IBR domain, a half RING-finger domain 201 257 IPR002867 -
Mibi04g0983 261 Pfam IBR domain, a half RING-finger domain 135 185 IPR002867 -
Mibi04g0983 261 Gene3D - 181 261 - -
Mibi04g0983 261 SMART ibrneu5 120 185 IPR002867 -
Mibi04g0983 261 SMART ibrneu5 195 257 IPR002867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0983 Mibi-ChrMibi04 20047258 20049161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0983 52 244 C3H Transcription Factor Family AT2G19610 28.218 4.90e-19 84.0