Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0955 ATGATTCACTCTGCTCATCTGAGCTACGGTGACGATACTCGCAACGGTATCGTTAGCCATATTTACTCTGCTTTTCATCGGAATGATATATGTACCTTCAAGAATGAGATAGGAGAATCCAATGAACCCGAGCTTCTCGAAGCTGCTGAGCAATCCCGAATTTCTTATGTCATCCTCTCCCAAAATTATCCCAATTCGCCACGCCGCTTGGACCAACTGGTAAAGATATGTGAGAAAATTGGCAAACCGGGATGCTCTGTCGTACCCATTTTCTTCGATGTCAGTCCATCTGATGTTCGAAAGCAGAGTGGGAGATATGAAGATTTCTTCGATAAATATGAAATTTACTTAATCGATGATGACGCCAAGGTACGAAGATGGAAAGAAGCGTTGACTCGAGTAGCCGATCTCGCTGGTATTGATGCACGGGATAAATCACAGGCAGAAGTTGTTAATAAAATTGTTGATCATGCATTACGCAAATTGGGACGACATAGCTCCTCAAGGCTGGCTGGTAAGATACTTGTCCCACCTTCCGAAGAGTACGAGGAAATTGTTGAAGCGATTCCTGTTGGGACTCAATCTCGCGTTGAAGCACCTCCCGACAAGTACGTGGAAATTGCTGAAGCGATTCTTGTCAGGCTCAAGGAAATTTCCGGGGATATATTTGTAGACGTTGCCTGTTTTTTTAATGGAGAAGATGAGAAGTATGCCACAGAAGTTCTAGAACATTGTGGATTCAATCCTAAAACTGGAATTAGAGCTCTCTGTGACAGTTCACTCCTGAAAATTGTCAATGGAAGGTTGTGGATGAATGATATACTGCAAGAACTTGGGTGGAAGATTGCAAAGGGAGAATTCCCCCATGAGCCAGCCAAATGGAGTAGGCTGTGGTCATACCAAGACATTCAAACTGTGAATACAGGAACGGGCAAAGTTGAAGCCATCGTCCTGAGCCCTGACGATCTGCAGGAGACGCCATTGAATGCTGAAGCTTTATCACAAATGAGACACCTCAGGCTAATCATATTCCCCAATGATGTGAAGATTTCAGGAAATCTCATCCACCTTTCCAACGAGTTACGGTTTCTGTCCTGGCGTAAATTTCCTTTCAGGTCTTTGCCCTCAAGTTTTGAGCCATATAAACTTGTTGAGCTGATCATGCCTGACAGCAATTTGATAGAATTATGGAAAGGCGAAAAGAAATTGCCAAAGCTGAGAAGCATCATTCTAAGTGGCTCTAAAAGTCTAATCAAGACACCAAATGTTAAAGGGGCAGAAAACCTTGAGAGGTTGGATCTTGAAGGATGCACTAGACTAGTGCAGGTGGACCCTTCTATTGCAGATCTTAAAAGGATCAAATTCCTGAATTTGAGGAACTGTGATCGCCTGGTCAGTATCCCAGACACCTTATTTATGTCCACTTCTCTTAAAATGAACATTGCCGGTTGTTCAAGGCTTGCAGAATGGTTGAACTCCGGAGGATCTTAA 1491 0.4339 MIHSAHLSYGDDTRNGIVSHIYSAFHRNDICTFKNEIGESNEPELLEAAEQSRISYVILSQNYPNSPRRLDQLVKICEKIGKPGCSVVPIFFDVSPSDVRKQSGRYEDFFDKYEIYLIDDDAKVRRWKEALTRVADLAGIDARDKSQAEVVNKIVDHALRKLGRHSSSRLAGKILVPPSEEYEEIVEAIPVGTQSRVEAPPDKYVEIAEAILVRLKEISGDIFVDVACFFNGEDEKYATEVLEHCGFNPKTGIRALCDSSLLKIVNGRLWMNDILQELGWKIAKGEFPHEPAKWSRLWSYQDIQTVNTGTGKVEAIVLSPDDLQETPLNAEALSQMRHLRLIIFPNDVKISGNLIHLSNELRFLSWRKFPFRSLPSSFEPYKLVELIMPDSNLIELWKGEKKLPKLRSIILSGSKSLIKTPNVKGAENLERLDLEGCTRLVQVDPSIADLKRIKFLNLRNCDRLVSIPDTLFMSTSLKMNIAGCSRLAEWLNSGGS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0955 496 SUPERFAMILY L domain-like 286 478 - -
Mibi04g0955 496 Pfam TIR domain 10 168 IPR000157 GO:0007165
Mibi04g0955 496 ProSiteProfiles TIR domain profile. 1 162 IPR000157 GO:0007165
Mibi04g0955 496 Gene3D - 3 169 IPR035897 -
Mibi04g0955 496 SMART till_3 2 137 IPR000157 GO:0007165
Mibi04g0955 496 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 139 IPR035897 -
Mibi04g0955 496 Gene3D Ribonuclease Inhibitor 303 494 IPR032675 -
Mibi04g0955 496 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 222 490 IPR044974 GO:0006952
Mibi04g0955 496 Pfam Leucine Rich Repeat 382 401 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0955 Mibi-ChrMibi04 19477780 19479761 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0955 222 490 WRKY Transcription Factor Family AT4G12020 37.153 3.60e-43 162