Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0954 ATGAGCGTGGAAGTCTTCGCTCTCCATATTGACTCAAGTCAACGCAGGGGATCGAATTATCTCTACTTGCAAGAGGCAAGGACCGAGGAGTTGACCATCGAAAGAGGCGGCGATCGTGCAGAGCAAAGAACAAAGTTGAGCATCTCAGTCTTAAGCGTTTTGGAAATGAAGTACCCAAGCTCATCTTCCTGGAAATACGATGTTTTCATTAGTTTCAAAGGAGAGGAAACTGGCGACATTTTCCTCGATGTCGATCCATCTGATGTTCGAAAGCAGAGTGGGAGGTATGAAGAATTATTCTACGAACACGCAACAGACTTCCCTCACAAGGTGCAAAAATGGAAGTTAGCATTGACTCGTGTAGCCAGTCTCTGTGGTTACGATGTGTCGGCCAAATCAGAGTCGGATGTTATTGATGACATTGTCCAAGATGCAATACGCAAATTGGGTCGTAGATTCTCCAGTCTGACTGTTGATCTAGTTGGCATGCAACCACGTGCTTTAGCATTTCAAAACCTCTTAGAGTTAGATTCAGAAGCTGTTCGAACGGTAGGCATATGGGGAATAGGTGGTGTGGGCAAAACTACACTTGCTACATGTGTGTATGATAGTATCTCTCCCAGATTTCATGCTGCTTGTCTCCTTCTTGATGTAAGTAGAGTTCACAAGTGTCATGGACTTGTGCGCCTACAAGAACAACTCCTTCTTGATTTAGAGGTGCCGGAGGATCACAGGGGAACCGATTTGATTAGCACTAGGCTTCGCAGCAGAAAAGTTCTTATTGTTCTTGACGGTGTTGACAGTGTTGATCAAGTGGAGGCACTGGCTGGAAATCCCACATGGTTTGGGCCTGGTAGTCGGATCATCATTACCACTAGAGATAGGCATATCCTCAAACCAGATGATGTACCTTACGAGCTCACACCACTGAATAAAAGCGAGTCTGATCGTCTTTTCTACAGAAAAGCCTTCAAACCACCACATGGTGCTCCCTCGAGTGGCTTTGAGATGATGCCTCAGTGTCTGCTACCATACGCTGCCGAGCTTCCACTAACACTCACTGTGCTAGCTTCCTCCATGCGTGGGCTACAGGAACCGTCAGATTGGATGTTTCTGTTTGAAAGATTGAAAGGATATCCTTCTAGCCAAGTTGTCATGGGAGTTCTCAAAGAAAGTTTCCTTCTGCGTAAGAAGATGGAGCGAGATATCTTTTTAGACATTGCCTGTTTCTTCACGGGAGCAGATGTGGACTATGTCACTCAAGTTCTACAACATTGTGGCTTCGACAACCCTGATGCTAAAATCCGAGAACTCCGTGACAGGTCACTCCTCAACATTGTCAATGGAAAATTGTGGATGCATGATCTGCTCCAAGACATGGGGCGCCAAATCGTAAAGAAGGGATTTCCTAATGAGCCAGCAAAGTGGACTAGGCTGTGGTCCTACCAAGATATCCAGACTGTAACTACGGGAACCAAAAACACTGAAGCCATCGCCCTGAGCCCGGGAGATTTGAAGGAGACGCCACTTAAGGCTAAAGCTTTATCACAGATGAGCGGCCTCAGACTGCTCAAATTCCCTCATAATGTGAGAGTTTCCGGAAACCTCAATGGCCTGTCCAACAAGTTACGGCTCCTTTCGTGGCATGGATTTCCCTTCAGCTCCTTGCCATCAAGTTTCGAACCGGATAGCCTTGTCGAGCTGATCATGCCTGACAGCAAACTTACACAACTATGGGAAGGAGAAAAGAGATTGCCAAATCTGAGGGTCATCGATCTACATGGCTCGAAAAGTCTTATCAGGACGCCAAATGTTAAAAGAGTAGAGAAGCTTGAGAGGTTAGATCTTGAAGGATGCACTGGATTGTTGGAGTTTGATCCGTCTGTGGCAGATCTTAAAGGGATCAAGATCCTGAATCTGAGAAACTGTGATAAACTAATCAGTATCCCAAAAACCTTATGTCTGTCAACTTCTCTTGAAATGCTGGACGTTTCTGGCTGTTCTAGACTTGCAAAACAGTTGAACTCCAAAGGACCGCAATCGACCAGAACACACTGA 2058 0.4582 MSVEVFALHIDSSQRRGSNYLYLQEARTEELTIERGGDRAEQRTKLSISVLSVLEMKYPSSSSWKYDVFISFKGEETGDIFLDVDPSDVRKQSGRYEELFYEHATDFPHKVQKWKLALTRVASLCGYDVSAKSESDVIDDIVQDAIRKLGRRFSSLTVDLVGMQPRALAFQNLLELDSEAVRTVGIWGIGGVGKTTLATCVYDSISPRFHAACLLLDVSRVHKCHGLVRLQEQLLLDLEVPEDHRGTDLISTRLRSRKVLIVLDGVDSVDQVEALAGNPTWFGPGSRIIITTRDRHILKPDDVPYELTPLNKSESDRLFYRKAFKPPHGAPSSGFEMMPQCLLPYAAELPLTLTVLASSMRGLQEPSDWMFLFERLKGYPSSQVVMGVLKESFLLRKKMERDIFLDIACFFTGADVDYVTQVLQHCGFDNPDAKIRELRDRSLLNIVNGKLWMHDLLQDMGRQIVKKGFPNEPAKWTRLWSYQDIQTVTTGTKNTEAIALSPGDLKETPLKAKALSQMSGLRLLKFPHNVRVSGNLNGLSNKLRLLSWHGFPFSSLPSSFEPDSLVELIMPDSKLTQLWEGEKRLPNLRVIDLHGSKSLIRTPNVKRVEKLERLDLEGCTGLLEFDPSVADLKGIKILNLRNCDKLISIPKTLCLSTSLEMLDVSGCSRLAKQLNSKGPQSTRTH 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0954 685 Gene3D - 79 154 IPR035897 -
Mibi04g0954 685 Pfam NB-ARC domain 171 376 IPR002182 GO:0043531
Mibi04g0954 685 Pfam Leucine Rich Repeat 565 583 IPR011713 -
Mibi04g0954 685 SUPERFAMILY L domain-like 500 670 - -
Mibi04g0954 685 SUPERFAMILY "Winged helix" DNA-binding domain 387 486 IPR036390 -
Mibi04g0954 685 PRINTS Disease resistance protein signature 183 198 - -
Mibi04g0954 685 PRINTS Disease resistance protein signature 346 360 - -
Mibi04g0954 685 PRINTS Disease resistance protein signature 583 599 - -
Mibi04g0954 685 PRINTS Disease resistance protein signature 253 267 - -
Mibi04g0954 685 Pfam TIR domain 80 153 IPR000157 GO:0007165
Mibi04g0954 685 Gene3D - 166 302 IPR027417 -
Mibi04g0954 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 407 IPR027417 -
Mibi04g0954 685 Gene3D Ribonuclease Inhibitor 478 683 IPR032675 -
Mibi04g0954 685 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 39 673 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0954 Mibi-ChrMibi04 19467998 19470693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0954 80 671 WRKY Transcription Factor Family AT4G12020 34.615 3.94e-81 280