Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0953 ATGAAAATCACTAGCTCATCTCCCTGCAAATACGAGATTTTCATTAGTTCCAGAGAAGATGTCACTGGCAACAGTTTCACTGGTAGACTTTATTCTACTCTTAGACAGAATGGTATATATGACTTCGGGAATGATACAACAATCGAGGAATCCCGACTTTTTCTCGTCGTCTTCTCCCAAAATTATGCTTCTTCCGCATGGTGCTTGGACCAACTGGTAAAGATAGATGACGCAATCCGCAAACCGGGACGCTTTGTCGTGCCAATTTTCCTCGATGTCGACCCATCCGATGTTAGAAAACAGAGTGGGAGCTATGAAGAATTATTCCATAAACACGCAACAGACTCCCCTGACAAGGTGCAAAGATGGAGGTTAGCATTGACTCGTGTAGCAAGTAGCCCTTCTTACGATGCGCGGGCCAAATCAAAGTCGAATGTTATTGATGACATTGTCCAAGTTGCAATACACAAATTGGGTCGTAGATTCTCCAGTCTGACTGTTGATCTAGTTGGCATGCAACCTCGTGCTTTAGACTTTCAAAGACTCTTAGACTTAGATTCAGAACCTGTTCGAACGGTAGGCATATGGGGGAAGGGTGGTGTGGGGAAAACCACTCTGGCTGCATGTGTGTATGATACTATCTCTCAACGATTTGATGCTGCGTGTCTCCTTCTTGATGTAAGTAGAGTTCTCAAGGATGATGGACTTGTGCGCCTACAAGAACAACTCATCCGAGAGATACTGCAGGAAGATGTAGAGTTGCCGAAGGATCACAGGGAAACCGATGTGATCGACTTGATTAGAGATGTACTTAACTGCAGAAAAGTCCTTATTGTTTTTGACGGTGTAGACAGTGTTGATCAGTTGGAGGCACTGGTTGGAAGTCCCACATCGTTTGGGGGGCCTGGGAGTCGGATCATCATTACCACCAGAGATCTCACCCCTCATAGAGTGGATGCAGCTTACAAGCTCACACCACTGGATAAGAATGAGTCTCTGCATCTTTTCTACAGAAAAGCCTTCGAATGTGGCTTTGATGTTTCCTCGAGGGGCTTTGATGTGCTGACCTATTCTCTGCTACCATACACTAAAGGCCTTCCACTAGCACTCACTGTGCTAGCTTCTTCCCTGCGTGGGCTACTGGAACAGTCAGATTGGATGTTTCTGTTTGAAAGATTGAAAGGATATCCTGGCGAAGATGATGTCATGGGAGTTCTCAAAGAAAGTTTACTTCTGCGTAAGAAGAGTGAGGTGGATGTCTTTGTAGAAATTGCCCGTTCCTTCACGGGAGAAGATGTGGACTATGCCACTCGGGTTCTACAACAACGGGGCTTTGACAACCTTGATGCTAAAATCCGAGTCCTCCGTGATAGGTCACTCCTCAACATTGTCAATGGAAAATTGTGGATGCATGATCTGCTCCAAGACATGGGGCGCCAAATCGTCAAGAAGGGATTTTCTGGCTGTTCTAGAGTTGCAAAATGA 1485 0.4552 MKITSSSPCKYEIFISSREDVTGNSFTGRLYSTLRQNGIYDFGNDTTIEESRLFLVVFSQNYASSAWCLDQLVKIDDAIRKPGRFVVPIFLDVDPSDVRKQSGSYEELFHKHATDSPDKVQRWRLALTRVASSPSYDARAKSKSNVIDDIVQVAIHKLGRRFSSLTVDLVGMQPRALDFQRLLDLDSEPVRTVGIWGKGGVGKTTLAACVYDTISQRFDAACLLLDVSRVLKDDGLVRLQEQLIREILQEDVELPKDHRETDVIDLIRDVLNCRKVLIVFDGVDSVDQLEALVGSPTSFGGPGSRIIITTRDLTPHRVDAAYKLTPLDKNESLHLFYRKAFECGFDVSSRGFDVLTYSLLPYTKGLPLALTVLASSLRGLLEQSDWMFLFERLKGYPGEDDVMGVLKESLLLRKKSEVDVFVEIARSFTGEDVDYATRVLQQRGFDNLDAKIRVLRDRSLLNIVNGKLWMHDLLQDMGRQIVKKGFSGCSRVAK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0953 494 Gene3D - 5 160 IPR035897 -
Mibi04g0953 494 Gene3D - 161 318 IPR027417 -
Mibi04g0953 494 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 486 IPR044974 GO:0006952
Mibi04g0953 494 Pfam TIR domain 10 158 IPR000157 GO:0007165
Mibi04g0953 494 PRINTS Disease resistance protein signature 363 377 - -
Mibi04g0953 494 PRINTS Disease resistance protein signature 270 284 - -
Mibi04g0953 494 PRINTS Disease resistance protein signature 192 207 - -
Mibi04g0953 494 SMART till_3 10 133 IPR000157 GO:0007165
Mibi04g0953 494 Gene3D - 326 410 IPR042197 -
Mibi04g0953 494 ProSiteProfiles TIR domain profile. 9 158 IPR000157 GO:0007165
Mibi04g0953 494 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 133 IPR035897 -
Mibi04g0953 494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 409 IPR027417 -
Mibi04g0953 494 Pfam NB-ARC domain 189 378 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0953 Mibi-ChrMibi04 19450593 19452654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0953 6 484 WRKY Transcription Factor Family AT4G12020 28.279 1.85e-43 163