Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0947 ATGACCTCAAGATCATTCCCTGTAAATCCATCTCACAATTTTTTCACCAAATACAGAGTGCTTTTCCTGGCCCTCACTATCTCATCTTCTCTAGTCATTTTCTGCTCAATCCTTTACTTCCTACACCATCTATGGTACTCAGTTTTACACAGAGCTAAAACGATCCCGTTTGACACAAATTCTCCCTTGAAGCTCCGAAGGTTTTCTTACAAAGAGCTCAAGCAAGCCACCAATGGTTTTCATACTGAAAATGTCATTGGCAAAGGAGGGTCAAGCACAGTTTTTAAAGGGAAGCTTAAAGATGGGAAATTCATTGCTATTAAGCATCTTGATGCTCTGTGTTTACAAACAGAGCAAGAGTTTCAGAATGAGCTTCAGATCCTTGGTGGGTTAAAGCCGTCCCCTTTCCTTATCACCTTTCTGGGATATTGTATGGAGAAGAACAAGAGAGCTTTGGTGTTTGAATATATGCCTAAGAGAAGCTTGCAGGAGTTTCTCTTTGGAGATGATGATGATGATGATGATGGCTATTTAAGTTGGGAGAGAAGGTTTCTTATTATATTGGATGTTGCTAGAGCTTTGGAATTCCTTCACCTTCAATGTGACACCCCAGTGATTCATGGGGATATCAAGCCAAGCAATGTTCTGCTGGATGATGAGCACAGGGCAAAGATTTCGGATTTCGGATTGTCAAGGATTAAAGTGGAGGAGGGTGACTTGGGTGATAAGAGTCAGGATCTATGGAAGAGCCAAGTAGATTTTGCTCTAGCTTTGAAGGCATCTTCATCCAAGTATAGTTGTGGGGTAGGTTTAAATGTTGGAGCTTTGAACTTGAATTCTTTAAATTCTAACGCCTGCATAGGTGAAAATGAAGCAAGGACAAATAGAGTCAAGGGGAAGGAAATCTCAAGTTTTGATGTTGGTGGTTATGATTGTAATTGGAAGAACACGTTTGTTCCAAGTGATGATGATCTTTCCAGCATTATTGATCACGGTAAAGAGTTAAATGTTAATGCTTCCTCAATAGATGAAGAAAAGCCAAATGAAAAACAATGGGGAGAAGATTGGTGGTGGAAACAGGATGAAAGTGCGGAATTATGCAGTAAAGATTATGTCATGGAGTGGATAGGGAGTCAGATTCATCCATCAAGCACCGATTGGGATGATGAAGAAAAGAACATTCCTCAGGAAACAGAACTGGAAAATTCAAGTCCAAGAGATAAACCAGATGCTGAAAATGGTGCCCATGAGAACAAAGAATCGGTGGAAAAGAAATGTCATGAGAAGCATAGGAAGATGCAAGAGTTATGGAAAGAAGAGAATCTTGTAGAATCAAGCAAGAGAAGTAGGGGCAACCTGAAGAACCTTCGAAATAAGTGGAAGTTTTGTCTCTGCAAATGCAAAAATTTCATAAGGGAAGATCAGAATCAGAATGTTTATGATCATCAAAATGGGGAGTTTAGTTTTATAAAAGGTTGGAAGAAGAAGGAAGGAAATAATAGCCCTTCCATTGGAGGCGAGATGCGAAGTGGAGATCTTCTCAGCAGCACAACAACCAGCATTAGAGGAACATTAAGTTATCTTGAGAAAGCTAGTTTAGTGAGTTGGTGTAGGCAATTGGCACAATCTAGTGGTAACATTTTAGAACTTGTAGATGAGAGGTTGAGGGATGATTATGACAAGGAGCAAGCAAGTTTGTGCATCAACTTGGCACTTTCTTGCTTACAGAAAAATCCAGAATTAAGGCCACATATTGGGGATATTGTTAAGATTTTGAATGGGGATATGGATCTACCACCACCAATTCCATTTGAGTTCTCTCCTTCCCCACCTTTTAGACTGTATAGCAGATCATGA 1857 0.399 MTSRSFPVNPSHNFFTKYRVLFLALTISSSLVIFCSILYFLHHLWYSVLHRAKTIPFDTNSPLKLRRFSYKELKQATNGFHTENVIGKGGSSTVFKGKLKDGKFIAIKHLDALCLQTEQEFQNELQILGGLKPSPFLITFLGYCMEKNKRALVFEYMPKRSLQEFLFGDDDDDDDGYLSWERRFLIILDVARALEFLHLQCDTPVIHGDIKPSNVLLDDEHRAKISDFGLSRIKVEEGDLGDKSQDLWKSQVDFALALKASSSKYSCGVGLNVGALNLNSLNSNACIGENEARTNRVKGKEISSFDVGGYDCNWKNTFVPSDDDLSSIIDHGKELNVNASSIDEEKPNEKQWGEDWWWKQDESAELCSKDYVMEWIGSQIHPSSTDWDDEEKNIPQETELENSSPRDKPDAENGAHENKESVEKKCHEKHRKMQELWKEENLVESSKRSRGNLKNLRNKWKFCLCKCKNFIREDQNQNVYDHQNGEFSFIKGWKKKEGNNSPSIGGEMRSGDLLSSTTTSIRGTLSYLEKASLVSWCRQLAQSSGNILELVDERLRDDYDKEQASLCINLALSCLQKNPELRPHIGDIVKILNGDMDLPPPIPFEFSPSPPFRLYSRS 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0947 618 SMART serkin_6 80 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0947 618 MobiDBLite consensus disorder prediction 401 430 - -
Mibi04g0947 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Mibi04g0947 618 FunFam Os07g0541700 protein 157 246 - -
Mibi04g0947 618 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Mibi04g0947 618 Gene3D Phosphorylase Kinase; domain 1 55 156 - -
Mibi04g0947 618 Pfam Protein kinase domain 80 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0947 618 FunFam Receptor-like serine/threonine-protein kinase At4g25390 49 156 - -
Mibi04g0947 618 MobiDBLite consensus disorder prediction 382 430 - -
Mibi04g0947 618 ProSiteProfiles Protein kinase domain profile. 80 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0947 618 SUPERFAMILY Protein kinase-like (PK-like) 531 611 IPR011009 -
Mibi04g0947 618 Gene3D Transferase(Phosphotransferase) domain 1 511 600 - -
Mibi04g0947 618 Gene3D Transferase(Phosphotransferase) domain 1 157 268 - -
Mibi04g0947 618 SUPERFAMILY Protein kinase-like (PK-like) 57 237 IPR011009 -
Mibi04g0947 618 PANTHER OS07G0586332 PROTEIN 12 528 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0947 Mibi-ChrMibi04 19409311 19411314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0947 65 271 Receptor kinase-like Gene Family AT3G58690 39.720 7.82e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Mibi04g0947 Pkinase 1.3e-28 CL0016