Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0937 ATGTTCAACTCTTGCTATAATAATCAATACAGCCAGAGGGACAAATTTGTGAGGTTGAAATCTAACACTTCAGAAGAATCCAGCCAAGGTGGGATCTTGAAGAAGCTCGGATTTAATGTAGAGGGTAAACCACGTGAAAACAAGAATGCATCAAGATCCTTTAGGATGGGAATGAAGAGAGGATCAGATGGATTAAAGACATTTGGGAGATCACTGAAAAGTGGAGTCACTTGGCAAGTTTTCCCAGAAGATCTTAAAGTATCAGAGACTAAAGTATTTGATCCTCAAGACAAGACCCTTTTGCTTTGGAACAAGTTTTTTGAGCTTCTTTGTATTATTTCAGTTTCTTGTGATCCTCTCTTCTTCTATCTTCCTTACTTTAACCTCAAATCTCATTGCCTTGCCATTGATACTGCACTTGCTTCTACTGCTATCATTCTGAGATCAGTACTTGATGCTATCTATCTCATCCGCATGGTTTTCCAATTCCGGACTGCTTACATTGCGCCATCCTCTCGGGTTTTCGGGCGAGGTGAACTTGTCATTGATCCTAAGAAGATCGCCAAGAGATACCTTGGGCGTTACTTCATTATTGATTTCAGTTCTGTGCTGCCATTGCCTCAGATTGTGGCGGCAGACTATCTTCGCAAAACAAAAAGTTTAGAGGTGTTAGCAACAAAAACAACGTTATTGAGAGTAGTCATCCTCCAATATATTCCGAGATTCGCACGATTCATCCCTTTAGCTACTGAAGTTAAGAAGACAGCTGCTGTTTTTTCTGATAATGCACTTGTGGGTGCCACCTACTATTTGGTCTGGTACATGCTTGTTAGCCATATAGTAGGGTCTGCGTGGTACTTACTAGCTATTGAACGAAATGACACATGCTGGCAGCAAGCTTGTGCTGGTGCTGCTTCACAAGGATGCATTCCACATTTCTTGTACTGTGAGAATTCTAATAAGCACTATCCCGGATATGAAGCCTGGCAAAAGGTCAATGGGGAAATTCTTGACAGAAGTTGTGGAGTTAGAGGTGATGACCCACCATTTGATTATGGAATCTACACTAGAGTTATAGAGAAGGGTATTACTGCCTCCAGTGATATGTGGAGTAAATTCTGTCTATGTTTTTGGTGGGGCCTTCAAAATGTAAGCACACTTGGGCAGGGACTTGACACAAGTACCTACATTGGGGAGGCTTGTTTTTCCATATTCATATGTATTTTGGGGCTTGTCCTTATGGCTCTTCTGATTGGAAAAGTGCAGAACTACCTGCAATCAATAACTGTTCGTCTTGAAGAAATGAGGATAAAAAGGCGTGATTCTGAGCAATGGATGCATCACCGTGTGCTTCCTCAAGAGCTAAGGGAAAGAGTGAGACGCTATGATCAATACAAATGGATGGAAACGCGAGGAGTCGACGAAGAGTCCTTGGTTCAGAGCCTTCCTAAAGATCTAAGGAGGGATATCAAACGCCACCTTTGCTTGAATTTGGTCAGGAGGGTTCCTCTATTTGCCAATATGGACGAACGCTTGCTAGATGCTATATGTGAGCGTTTGAAGCCTAGCCTGTACACAGAAGGAACATACATTGTTAGGGAAGGAGATCCAGTAGTTGAGATGTTCTTCATCATACGTGGTCGTTTGGAGAGTATTACCACAGATGGTGGAAGGAGTGGATTTTTCAATAGAGGTCTCCTCAAAGAAGGTGATTTCTGTGGAGAAGAGCTTCTAACATGGGCATTAGACCCCAAATCTGCAGCAAACTTACCATCATCTACAAGGACAGTGAAAGCTATCAATGAAGTTGAAGCATTTGCTTTAGAAGCAGAGATGTTGAAGTATGTTGCTTTACAATTCAGGAGACTGCATAGCAGACAAGTTCAGCAAACATTCCGGTTCTACTCGCAGCAATGGAGAACATGGGCAGCAACTTTCATTCAGGCTGCATGGAGAAGGTATGCCAAAAGGAAGTTGATGGAGTCACAAATAATGGAGGAGGAGGGGATGAAGGTAGATTATGGTCATGATGATGATGATGATGGAAAAGCTTTGATTTCAAGAAGTGAAAGTTCATCCAGTGTTAGATTGGGTTCAACCATGCAAGTTTCTCGATTTGCTGGTATTCTACTTGTTAAGAATCGTTCTCTCAAAAAGCCTCCTGAACCTGACTTCAGTGAATATGATCTGGGAGATTGA 2199 0.4211 MFNSCYNNQYSQRDKFVRLKSNTSEESSQGGILKKLGFNVEGKPRENKNASRSFRMGMKRGSDGLKTFGRSLKSGVTWQVFPEDLKVSETKVFDPQDKTLLLWNKFFELLCIISVSCDPLFFYLPYFNLKSHCLAIDTALASTAIILRSVLDAIYLIRMVFQFRTAYIAPSSRVFGRGELVIDPKKIAKRYLGRYFIIDFSSVLPLPQIVAADYLRKTKSLEVLATKTTLLRVVILQYIPRFARFIPLATEVKKTAAVFSDNALVGATYYLVWYMLVSHIVGSAWYLLAIERNDTCWQQACAGAASQGCIPHFLYCENSNKHYPGYEAWQKVNGEILDRSCGVRGDDPPFDYGIYTRVIEKGITASSDMWSKFCLCFWWGLQNVSTLGQGLDTSTYIGEACFSIFICILGLVLMALLIGKVQNYLQSITVRLEEMRIKRRDSEQWMHHRVLPQELRERVRRYDQYKWMETRGVDEESLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTEGTYIVREGDPVVEMFFIIRGRLESITTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKSAANLPSSTRTVKAINEVEAFALEAEMLKYVALQFRRLHSRQVQQTFRFYSQQWRTWAATFIQAAWRRYAKRKLMESQIMEEEGMKVDYGHDDDDDGKALISRSESSSSVRLGSTMQVSRFAGILLVKNRSLKKPPEPDFSEYDLGD 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0937 732 ProSiteProfiles cAMP/cGMP binding motif profile. 504 634 IPR000595 -
Mibi04g0937 732 SUPERFAMILY Voltage-gated potassium channels 95 426 - -
Mibi04g0937 732 ProSiteProfiles IQ motif profile. 640 669 IPR000048 GO:0005515
Mibi04g0937 732 Gene3D Helix hairpin bin 431 495 - -
Mibi04g0937 732 FunFam Cyclic nucleotide-gated ion channel 1 502 620 - -
Mibi04g0937 732 Gene3D - 108 430 - -
Mibi04g0937 732 SMART cnmp_10 504 635 IPR000595 -
Mibi04g0937 732 Gene3D Jelly Rolls 502 622 IPR014710 -
Mibi04g0937 732 FunFam Cyclic nucleotide-gated ion channel 1 431 495 - -
Mibi04g0937 732 SUPERFAMILY cAMP-binding domain-like 434 623 IPR018490 -
Mibi04g0937 732 Pfam Cyclic nucleotide-binding domain 525 612 IPR000595 -
Mibi04g0937 732 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 83 725 - -
Mibi04g0937 732 Pfam Ion transport protein 102 431 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi04g0937 732 CDD CAP_ED 504 635 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0937 Mibi-ChrMibi04 19270192 19275579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0937 6 725 Ion Channels AT1G15990 63.919 0.0 931