Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0933 ATGGACATCAACCAACCAGACAAGAAACAGACAGAAAGAGAGGATCATCTTCAACAACAACGTTGTTCATCTTCTTCTTCTCCTCATCTAGATCTAAGTCTCTGTAACAACTCATCATCATCTTCTGAAATATCTCCCCATGGCAGAATCTTCTCCTGCAACTACTGTCACCGAAAATTCTACAGCTCGCAGGCACTTGGGGGACACCAAAACGCACACAAGCGTGAGAGAACTCTAGCAAAAAGATCCCACAACAACAACAACAACGTTGGTAATGGTGCTTCTGCTTCACATGTTTCTGCAGATTTTGGTCAAAGATATTATTATTATTCATGTATGGCTTCTCTTCCCTTGCATGGTTCTTCATCTAACAGACCACTTGGGATTCAGCTTCGTTCCATGATTCAAAAGCCCTCCATTTCTTCTTCTTCTTCTTTTCAACCACTTGGTTTAAAGAAGAATCTATTGTTATTTGGAGGCTCCCATGTTTGGACAGAGTCAACTGAATCTTCATCATTTTCTTCTTCTTTATTAGCATCTGGGATTCCAAAGTTTTCTCCAAAGCCTGTCTCAGAGGATCGGCTTCACAAACTTGACTTGTCCCTCAAACTCTGA 615 0.4114 MDINQPDKKQTEREDHLQQQRCSSSSSPHLDLSLCNNSSSSSEISPHGRIFSCNYCHRKFYSSQALGGHQNAHKRERTLAKRSHNNNNNVGNGASASHVSADFGQRYYYYSCMASLPLHGSSSNRPLGIQLRSMIQKPSISSSSSFQPLGLKKNLLLFGGSHVWTESTESSSFSSSLLASGIPKFSPKPVSEDRLHKLDLSLKL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0933 204 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 25 169 IPR044246 GO:0009788
Mibi04g0933 204 MobiDBLite consensus disorder prediction 1 19 - -
Mibi04g0933 204 MobiDBLite consensus disorder prediction 1 30 - -
Mibi04g0933 204 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Mibi04g0933 204 SUPERFAMILY beta-beta-alpha zinc fingers 48 79 IPR036236 -
Mibi04g0933 204 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Mibi04g0933 204 Gene3D Classic Zinc Finger 23 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0933 Mibi-ChrMibi04 19250295 19250909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0933 49 140 C2H2 Transcription Factor Family AT1G80730 58.511 4.24e-26 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi04g0933 None None None