Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0930 ATGGACAATGAGGAGATTCCTTCAGCACCTACAACCCCAGGAACTCCTGGTGGACCTCTGTTTGGAGGTTTCAAGTCTGATAAAAGTAATGGTAATGGCTATGGAAGGAAGAAATCACTTCTGAATAAGTGTAAGTGTTTCAGTGTTGAAGAATGGAATGTGGAAGAAGGAGCTCTGCCTAGAGTCTCTTGCTCATTGCCACCCCCTCCTATCCCTCTTGCAAGAAAGGTAGGAGCTGAGTTCATAGGCACTCTGATTCTAATGTTTGCTGGCACAGCCGCTGCCATAGTGAACCAGAAGACACAAGGCGCTGAGACTCTCATCGGCTGCGCCGGCACCACCGGTCTCGCCGTCATGATCGTCATCCTCTCCACCGGCCACATCTCCGGCGCTCATCTTAACCCCGCCGTCACCATCTCCTTTGCTGCACTAAAACACTTCCCATGGAAACATGTTCCAGTGTACATTGGAGCTCAAGTAATGGCATCAATATGTGCAGCATTTGCATTAAAGGGTATATTTCATCCATTCATGGATGGAGGAGTTACTGTTCCTTCAGGAGGATTAGGCCAAGCCTTTGCTTTGGAGTTCATCATCAGTTTCAACCTCATGTTCGTTGTCACTGCCGTAGCCACCGACACAAGAGCCGTGGGAGAGCTTGCTGGAATCGCAGTGGGAGCCACTGTTATGCTCAATATCCTCATCGCAGGGCCAGCAACAGGAGGATCAATGAACCCAGTGAGGACATTAGGGCCGGCAATAGCAGCAAATAACTACAGAGGAATATGGTTGTATCTCATAGCTCCCATACTTGGAGCTTTGAGTGGAGCAGGCATTTACACCTTAGTGAAGCTAAGTGATGAACAAGAAGAAGAGGCCAAGGCTATTACTACTTCTGCCCCTGGTAGCTTCAGAAGATGA 921 0.4875 MDNEEIPSAPTTPGTPGGPLFGGFKSDKSNGNGYGRKKSLLNKCKCFSVEEWNVEEGALPRVSCSLPPPPIPLARKVGAEFIGTLILMFAGTAAAIVNQKTQGAETLIGCAGTTGLAVMIVILSTGHISGAHLNPAVTISFAALKHFPWKHVPVYIGAQVMASICAAFALKGIFHPFMDGGVTVPSGGLGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGGSMNPVRTLGPAIAANNYRGIWLYLIAPILGALSGAGIYTLVKLSDEQEEEAKAITTSAPGSFRR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0930 306 ProSitePatterns MIP family signature. 132 140 IPR022357 -
Mibi04g0930 306 PANTHER AQUAPORIN NIP2-1 42 288 IPR034294 -
Mibi04g0930 306 FunFam Aquaporin NIP2-1 63 295 - -
Mibi04g0930 306 Pfam Major intrinsic protein 74 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi04g0930 306 Gene3D Glycerol uptake facilitator protein. 70 296 IPR023271 -
Mibi04g0930 306 CDD MIP 75 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi04g0930 306 PRINTS Major intrinsic protein family signature 75 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi04g0930 306 PRINTS Major intrinsic protein family signature 151 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi04g0930 306 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi04g0930 306 PRINTS Major intrinsic protein family signature 226 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi04g0930 306 PRINTS Major intrinsic protein family signature 114 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi04g0930 306 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi04g0930 306 MobiDBLite consensus disorder prediction 1 25 - -
Mibi04g0930 306 SUPERFAMILY Aquaporin-like 72 288 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0930 Mibi-ChrMibi04 19197915 19200670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0930 1 306 Major Intrinsic Protein MIP AT1G80760 76.206 3.36e-166 462