Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0917 ATGGATATGGATTGTTCATCTTGGGTCAACACTTCCTTGGATCTCAACATAAGACCTCATCATCACATGCTTCATGAAGAAGTTCCACATCCAAAGAAGGAGGTGGAAAGCAATTTCTTATCTGGGAGGAAATCTTCTGTAAAAGAAGAGACAAGTGGGGCGTTGGAGGATGAATTAAAGAGGGTGAGTGCGGAGAACAAGAAGTTGACAGAAATGCTCACAGAGATGTGTGAGAATTACAATTCTCTGAGAAGACACTTGGCTGAATACATGAGAAACAATCCTCAAAAAGATCTCAACAACAACACAATCCCATCAAAGAAAAGGAAGCCTGACAATAGCAACACTAATAGTAATCCCATGGCCGTTAATGGCACCTCAGAGAGCTGCTCAACTGATGAAGAATCATGCAAGAAACCTAAGGAAGGCACCGACAAAGCAAAAGTTTCCAAAGCTTATGTCAGGACTGAATCATCTGATACTAGCCTGATTGTGAAGGATGGATATCAATGGAGGAAATATGGGCAAAAGGTGACCAGAGATAACCCATCTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAAGCTGTCCTGTTAAAAAGAAGGTGCAAAGAAGTGTGGAAGATCAATCTGTTTTGGTTGCAACATATCTAGGGGAACACAATCATCCTCATCCTTCTCAGATGGAGACATCACCAACTTCAGGAAGTAGCCGTTTTGTGAGCCAACCTTCTTCAATACCATGTTCATCAGCATCTCTCAGCTCTTCCTCTGTACCAGCCACAATTACCTTTGACTTGACAAAATCCAAGTCCAGCACCAACAATAACAACATGAATACCAACCACCCCGCCGCCTCGGCCGCCCAGAAACCTAAACCGAAAGCTGATTCACCTGAAGTCCCTCAGATTTTGGTGGAACAGATGGCCTCTTCATTGACTAAAGATCCCAATTTCAGAGCAGCACTTGTTGCTGCCATTTCAGGGAAAATATCCCACATAAACTAG 1008 0.4315 MDMDCSSWVNTSLDLNIRPHHHMLHEEVPHPKKEVESNFLSGRKSSVKEETSGALEDELKRVSAENKKLTEMLTEMCENYNSLRRHLAEYMRNNPQKDLNNNTIPSKKRKPDNSNTNSNPMAVNGTSESCSTDEESCKKPKEGTDKAKVSKAYVRTESSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYLGEHNHPHPSQMETSPTSGSSRFVSQPSSIPCSSASLSSSSVPATITFDLTKSKSSTNNNNMNTNHPAASAAQKPKPKADSPEVPQILVEQMASSLTKDPNFRAALVAAISGKISHIN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0917 335 SMART WRKY_cls 165 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi04g0917 335 MobiDBLite consensus disorder prediction 225 244 - -
Mibi04g0917 335 ProSiteProfiles WRKY domain profile. 160 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi04g0917 335 SUPERFAMILY WRKY DNA-binding domain 161 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi04g0917 335 MobiDBLite consensus disorder prediction 219 244 - -
Mibi04g0917 335 MobiDBLite consensus disorder prediction 93 157 - -
Mibi04g0917 335 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 331 IPR044810 GO:0003700
Mibi04g0917 335 FunFam WRKY transcription factor 40 150 227 - -
Mibi04g0917 335 MobiDBLite consensus disorder prediction 132 153 - -
Mibi04g0917 335 MobiDBLite consensus disorder prediction 94 131 - -
Mibi04g0917 335 MobiDBLite consensus disorder prediction 269 301 - -
Mibi04g0917 335 MobiDBLite consensus disorder prediction 269 287 - -
Mibi04g0917 335 Coils Coil 52 79 - -
Mibi04g0917 335 Pfam WRKY DNA -binding domain 166 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi04g0917 335 Gene3D WRKY domain 147 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0917 Mibi-ChrMibi04 18957498 18959009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0917 1 335 WRKY Transcription Factor Family AT1G80840 49.412 1.36e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi04g0917 WRKY 1.5e-22 CL0274