Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0907 ATGGAAGGAGGCAGCCTGGAAGAGATCAAGAATGAAAATGTCGACCTTGAGCGAATACCCATAGAGGAAGTGTTCCAAAAATTGAACTGTACAAAACAAGGTTTGACTACTGATGAGGGACAAAGGAGAATCGCAGAAAGCAAGGTTCTTAAATTCCTGGGTTTTATGTGGAATCCTCTCTCATGGGTCATGGAAGCAGCTGCTATAATGGCCATTGCTCTGGCCAATGGAGGGGGGCGACCACCAGACTGGCAGGATTTCTTGGGGATTATGGCATTGCTCCTCATAAACTCAACTATTAGTTTCATTGAAGAGAACAATGCAGGGAATGCAGCTGCGGCACTTATGGCAAGCCTTGCCTTGAAAACTAAGGTTTTAAGGGATGGAAGGTGGAGTGAGCAAGATGCATATGAGTTGGTACCTGGAGATATAATTAGCATAAAATTAGGAGACATTGTCCCTGCAGATGCTCGTCTCTTGGAAGGAGATCCTTTAAAGATTGATCAGTCTGCACTTACCGGCGAGTCTTTGCCGGTTACAAAGAACCCGTCCGACGAAGTCTTCTCGGGTTCCACAGTGAAACAAGGAGAGATTGAGGCCATTGTGATTGCCACGGGGGTACATACCTTCTTTGGTAAAGCTGCTCACTTGGTTGATAGCACTAACCAAGTAGGACACTTTCAAAAGGTGTTGACGGCCATTGGTAACTTCTGCATTTGTTCAATAGCAATTGGGATAGTTGTAGAGATAATTGTGATGTACCCAATTCAACATAGGCGATATAGGAGTGGAATTGATAACATCTTGGTTCTTCTCATCGGAGGCATTCCGATCGCCATGCCCACGGTTTTATCGGTAACAATGGCTATTGGTTCTCATAGATTGTCACAACAAGGTGCCATCACTAAGAGGATGACAGCCATTGAGGAAATGGCTGGGATGGATGTTCTATGTAGCGACAAGACCGGCACCTTAACGCTCAACAAGCTTACGGTTGATAAGACCTTGATTGAGGTTTTTGTAAAAGATATTGATAATGACACTTTAATATTGCTTGGAGCAAGAGCCTCAAGGGTGGAGAATCAAGATGCTATTGATGCTTGTATTGTTGGGATGTTGGGTGACCCAAAGGAGGCTAGAGATGGCATTACAGAAGTACATTTCCTTCCCTTTAATCCAGTGGACAAGCGTACAGCCATAACATACATTGACTCTGCAGGAAATTGGCAGAGAGTAAGCAAAGGGGCACCAGAACAGATTGTAGAACTCTGTAATGTCAGAGAAGATGTGAAGAAAAAAGTTCATTCCATTATTGATAAGTTTGCTGACCGTGGCCTACGTTCTCTTGCTGTTGCAAGACAGAAAGTGCCAGGAAAGACCAAGGAGAGTCCTGGAGAACCATGGGAATTTGTTGGTCTCTTACCACTTTTTGATCCTCCTAGGCATGATAGTGCAGAGACTATCAGACGTGCTCTCCATCTTGGAGTGAACGTCAAGATGATCACCGGCGATCAACTAGCTATCGGAAAGGAGACTGGTCGTAGGCTTGGCATGGGAAGCAACATGTATCCTTCTTCCTCACTTCTTGGTGAACACAAGGATGAGTCCATTGCTGCACTTCCGATCGATGAGCTTATTGAGAAGGCTGATGGCTTTGCCGGCGTCTTTCCGGAGCACAAATATGAGATAGTGAAGAGACTACAAGATAGGAAACACATATGTGGAATGACTGGAGATGGTGTGAATGATGCTCCTGCATTGAAAAAGGCCGATATTGGGATCGCGGTAGCCGATGCAACCGATGCAGCTCGAAATGCATCTGACATAGTTTTGACAGAACCTGGTTTAAGTGTGATTATAAGTGCAGTGTTAACAAGCAGAGCCATTTTCCAGAGAATGAAGAATTACACCATCTATGCAGTTTCTATAACAATCCGAATTGTGTTGGGATTCCTCTTGCTTGCTCTTATCTGGAAATTTGATTTCTCACCTTTTATGGTTCTGATCATTGCCATACTAAATGATGGGACCATCATGACCATTTCTAAGGACAGAGTCAAGCCATCACCTTCTCCAGATTCATGGAAACTAAATGAGATTTTTGCCACTGGGATAGTACTTGGATCCTACCTGGCTATTATGACTGTTGTTTTCTTCTGGGCTGCCCATGATTCTGATTTCTTCACAGAAAAATTTGGTGTTAGATCAATTAGAGAAAATGATAGTGCACTAACATCAGCTGTATATCTTCAAGTGAGTATTGTGAGTCAAGCTCTCATCTTTGTAACAAGGTCAAGAAGCTGGTCTTATATTGAACGCCCTGGTTTTTATCTGTTGGCAGCATTTCTTCTAGCACAATTGGCTGCAACTTTAATAGCGGTGTACGCAAATTGGAGATTTGCAAATATAGAAGGAATTGGATGGGGTTGGGCAGGAGTAATCTGGCTTTATAGCATTGTCTCCTACATTCCTTTGGATTTTCTGAAATTCATAATCCGATATGCATTGAGTGGGAAAGCATGGAATAACATTACTGAGAATAAGACTGCTTTCACAACGAAGAAGGATTATGGTAGAGGAGTACGAGAAGCTCAATGGGCTGCAGCTCAACGGACCCTCCATGGACTAAATCCTCCTCAAGCAGTGCCAATCTTTGACGAAATGAATACCTATGGTGAATTATCTGAACTTGCAGAACAAGCTAAAAAACGAGCTGAAGTTGCAAGGTTGAGGGAGCTTCACACGTTGAAGGGTCATGTGGAGTCGGTGGTGAAATTGAAGGGACTTGACATAGATACAATTCAGCAAAACTATACCGTTTGA 2823 0.4339 MEGGSLEEIKNENVDLERIPIEEVFQKLNCTKQGLTTDEGQRRIAESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFLGIMALLLINSTISFIEENNAGNAAAALMASLALKTKVLRDGRWSEQDAYELVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTVKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGIVVEIIVMYPIQHRRYRSGIDNILVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFVKDIDNDTLILLGARASRVENQDAIDACIVGMLGDPKEARDGITEVHFLPFNPVDKRTAITYIDSAGNWQRVSKGAPEQIVELCNVREDVKKKVHSIIDKFADRGLRSLAVARQKVPGKTKESPGEPWEFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARNASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLNEIFATGIVLGSYLAIMTVVFFWAAHDSDFFTEKFGVRSIRENDSALTSAVYLQVSIVSQALIFVTRSRSWSYIERPGFYLLAAFLLAQLAATLIAVYANWRFANIEGIGWGWAGVIWLYSIVSYIPLDFLKFIIRYALSGKAWNNITENKTAFTTKKDYGRGVREAQWAAAQRTLHGLNPPQAVPIFDEMNTYGELSELAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQNYTV 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0907 940 Coils Coil 891 911 - -
Mibi04g0907 940 PRINTS H+-transporting ATPase (proton pump) signature 608 633 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0907 940 PRINTS H+-transporting ATPase (proton pump) signature 434 452 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0907 940 PRINTS H+-transporting ATPase (proton pump) signature 577 593 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0907 940 PRINTS H+-transporting ATPase (proton pump) signature 749 770 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0907 940 PRINTS H+-transporting ATPase (proton pump) signature 549 565 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0907 940 FunFam Plasma membrane ATPase 121 205 - -
Mibi04g0907 940 SUPERFAMILY HAD-like 314 624 IPR036412 -
Mibi04g0907 940 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 90 337 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0907 940 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 552 663 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0907 940 Pfam haloacid dehalogenase-like hydrolase 314 591 - -
Mibi04g0907 940 SMART Cation_ATPase_N_a_2 15 76 IPR004014 -
Mibi04g0907 940 Gene3D - 121 205 - -
Mibi04g0907 940 FunFam ATPase 4 plasma membrane-type 562 804 - -
Mibi04g0907 940 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 836 IPR023298 -
Mibi04g0907 940 FunFam Plasma membrane ATPase 330 477 - -
Mibi04g0907 940 Pfam E1-E2 ATPase 121 297 - -
Mibi04g0907 940 Gene3D - 330 477 IPR023299 GO:0000166
Mibi04g0907 940 SFLD p-type atpase 300 628 IPR044492 -
Mibi04g0907 940 SFLD Haloacid Dehalogenase 300 628 - -
Mibi04g0907 940 FunFam Plasma membrane ATPase 470 625 - -
Mibi04g0907 940 Gene3D - 315 614 IPR023214 -
Mibi04g0907 940 PRINTS P-type cation-transporting ATPase superfamily signature 472 483 - -
Mibi04g0907 940 PRINTS P-type cation-transporting ATPase superfamily signature 168 182 - -
Mibi04g0907 940 PRINTS P-type cation-transporting ATPase superfamily signature 318 332 - -
Mibi04g0907 940 PRINTS P-type cation-transporting ATPase superfamily signature 577 596 - -
Mibi04g0907 940 PRINTS P-type cation-transporting ATPase superfamily signature 494 504 - -
Mibi04g0907 940 PRINTS P-type cation-transporting ATPase superfamily signature 600 612 - -
Mibi04g0907 940 ProSitePatterns E1-E2 ATPases phosphorylation site. 320 326 IPR018303 -
Mibi04g0907 940 SUPERFAMILY Calcium ATPase, transduction domain A 122 218 IPR008250 -
Mibi04g0907 940 Gene3D - 889 940 - -
Mibi04g0907 940 Gene3D - 83 804 - -
Mibi04g0907 940 CDD P-type_ATPase_H 34 830 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mibi04g0907 940 PANTHER CALCIUM-TRANSPORTING ATPASE 18 872 - -
Mibi04g0907 940 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 46 795 IPR006534 GO:0008553|GO:0016020|GO:0120029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0907 Mibi-ChrMibi04 18766094 18772632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0907 5 940 Primary Pumps ATPases AT3G42640 81.521 0.0 1580