Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0906 ATGGACAGTTTTAATCAACCTTCTTTCTCTTCCATGAGTGACAATATCAACACCATCACCGCCGCCACAACCACCACTATCAGTAGCTTATCCTTCAACAACTCCGCCGGTGCCGGCCAATCCAAGCATAACAGCCCCAGTTCAATCATCTCGGGGCTTTCTAGTTTCTGCGACAAACCAACAATTATGTCATCTTCTCATCAGTCAGCTTATGTTCTATCTTTTGATAACTCAACATTAATACCGGCAACAACTGATGATGCCGCCCGTTATGATCAGAAACATGAACCTGTTTCAAACACGCGTGCTTCGCTAAAACGGACGCCAGAAAACAATCACTGTAAGTCAAAAGCCCATCAAAGGACAAGGAAGAGTAGAGCGTCATCTGAGACATTGGATCACATAATGTCTGAGAGAAAAAGGAGACAGGAACTTGCTGAGAAGTTTATTGCACTCTCTGCTACAATTCCTGGTCTGAAGAAGTTTGACAAGTCATCTGTACTAAGCGAAGCTATCAATCATATAAAGAAACTTAAAGAACGAGTGAGAGAATTAGAGGAACAGAACAAGAAGATAAGTGATGGCGAGTCATTATTAATGCCAAGCATAAAGAAATCATCATGCCACCACTTCAAGGCTGAAGATGATCAATATCAAGAGCCTGATGATTGCTTCAGAATAATCAACAAAACATTGCTTGAAGTTGAAGCAAGAGTCTTTCACAAACAAGTTCTCATCAGAATTCACTGTGAGAAGCACAGAAGTGTTATGCTTAATATATTGGCCCAACTCAAGAGCCTCCATTTCTCCATAATCAGCTCTAGCGTCTTAACCTTTGCCAATTCCGCTCTCGACATCACCATTATTGCTGAGGTTGAGGAACACAAAATAGCAGTGAAGGAAGTTGCGAAAAAGCTTCGATTGGCTGTGTTGAAGACTTATAATGGTACATGA 954 0.414 MDSFNQPSFSSMSDNINTITAATTTTISSLSFNNSAGAGQSKHNSPSSIISGLSSFCDKPTIMSSSHQSAYVLSFDNSTLIPATTDDAARYDQKHEPVSNTRASLKRTPENNHCKSKAHQRTRKSRASSETLDHIMSERKRRQELAEKFIALSATIPGLKKFDKSSVLSEAINHIKKLKERVRELEEQNKKISDGESLLMPSIKKSSCHHFKAEDDQYQEPDDCFRIINKTLLEVEARVFHKQVLIRIHCEKHRSVMLNILAQLKSLHFSIISSSVLTFANSALDITIIAEVEEHKIAVKEVAKKLRLAVLKTYNGT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0906 317 PANTHER BHLH TRANSCRIPTION FACTOR 2 313 - -
Mibi04g0906 317 MobiDBLite consensus disorder prediction 90 133 - -
Mibi04g0906 317 Gene3D - 115 194 IPR036638 GO:0046983
Mibi04g0906 317 Coils Coil 168 195 - -
Mibi04g0906 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 178 IPR011598 GO:0046983
Mibi04g0906 317 SMART finulus 135 184 IPR011598 GO:0046983
Mibi04g0906 317 Pfam Helix-loop-helix DNA-binding domain 134 178 IPR011598 GO:0046983
Mibi04g0906 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 193 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0906 Mibi-ChrMibi04 18753188 18757411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0906 125 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.026 1.95e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g0906 HLH 9.5e-08 No_clan