Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0903 ATGGGTAATTTTCTTGTTATGTTCCTCCTCATTTGGGTATCATGCTTTTCTCCTTCTGTTTCTCATTTTTTCGCAAATGCTGAAGCTGAATCTCCAGGTGTTGCTGAGGTTAGAGTAGGGCATCACCAGAATTTAGACAAGAGAATTATAGTAGCACTTGCTGTTTGTTCTGCTCTTCTTGTCTCAATCTTCCTATTTTTAACATATATGTGGTGCAATCGACACAAAATGTTCAAAGTTCCCAGTTCTAAAAGCCCCGAGACTATAGAAGCTGCAAAAGGGTTGTCACTGAGCCCTGTTGATGTTAAATTTAATTACTCAAAAATGGCAGACAAGAAGAGTTCAATTGCTATATTTGACTTTCAGTTATTAGAGCTTGCAACAAACAACTTTTCTGAAAGTAATATTCTTGGTGAGAGTGGTTCTAGACTAGTGTACAGAGCTTGTTTTGATGAGCATCTCAAGGCAGCTGTGAAGAAAGCAGATAGCAGTGCTGATAGGGAATTTGAGAATGAAGTGAATTGGTTAAGCAAGACTCGGCATCAGAATATCATTAAACTTCTTGGATACTGTATTCATGGTGAATCAAGGTTTCTTGTATATGAAATGATGGAGAATGGATCTTTGGAAACTCAGTTACACGGGCCTAGTCATGGTTCATCTTTAAATTGGCACCTCCGGTTAAAGATTGCTGTCGATGTTGCCAGGGCATTAGAATATCTCCATGAGCACTCTAATCCTCCTGTGGTTCATAGAGACCTAAAATCGTCTAATGTTCTTCTGGATTCTCAGTTTAATGCCAAGCTATCAGATTTTGGACTTGCTGTAAGTTCTGGAATGCAAGACAAGAACATAAAGATGTCAGGAACTTTGGGCTATGTAGCACCTGAGTACATATCATATGGTAAGCTAACTGATAAAAGTGATGTATATGCTTTTGGGGTTGTCCTTCTAGAACTTCTAACAGGAAGAAAAGCCATGGACAGGATGTCTTCAGACCAATACCAATCCATTGTAACATGGGCCATGCCTCAGCTAACTGACAGATCAAAGCTTCCAAGTATTCTAGATCCTATTATCAGAAACACAATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTATACTTTGTGTACAAACGGAACCTAGTTACCGGCCACTAATAACCGATGTCCTGCACTCTCTCATTCCTTTGGTGCCCATGGAGCTGGGAGGGTCTCTCAGAATTTCAGAATCAGTCTCCTCTGAGAATTCGCACTGA 1266 0.4005 MGNFLVMFLLIWVSCFSPSVSHFFANAEAESPGVAEVRVGHHQNLDKRIIVALAVCSALLVSIFLFLTYMWCNRHKMFKVPSSKSPETIEAAKGLSLSPVDVKFNYSKMADKKSSIAIFDFQLLELATNNFSESNILGESGSRLVYRACFDEHLKAAVKKADSSADREFENEVNWLSKTRHQNIIKLLGYCIHGESRFLVYEMMENGSLETQLHGPSHGSSLNWHLRLKIAVDVARALEYLHEHSNPPVVHRDLKSSNVLLDSQFNAKLSDFGLAVSSGMQDKNIKMSGTLGYVAPEYISYGKLTDKSDVYAFGVVLLELLTGRKAMDRMSSDQYQSIVTWAMPQLTDRSKLPSILDPIIRNTMDLKHLYQVAAVAILCVQTEPSYRPLITDVLHSLIPLVPMELGGSLRISESVSSENSH 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0903 421 Gene3D Phosphorylase Kinase; domain 1 98 203 - -
Mibi04g0903 421 Gene3D Transferase(Phosphotransferase) domain 1 204 403 - -
Mibi04g0903 421 ProSiteProfiles Protein kinase domain profile. 131 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0903 421 SUPERFAMILY Protein kinase-like (PK-like) 110 397 IPR011009 -
Mibi04g0903 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Mibi04g0903 421 PANTHER OS01G0750732 PROTEIN 30 405 - -
Mibi04g0903 421 FunFam probable receptor-like protein kinase At1g80640 204 402 - -
Mibi04g0903 421 Pfam Protein tyrosine and serine/threonine kinase 151 363 IPR001245 GO:0004672|GO:0006468
Mibi04g0903 421 SMART serkin_6 131 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0903 Mibi-ChrMibi04 18738171 18741617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0903 10 343 Receptor kinase-like Gene Family AT1G80640 47.059 3.72e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Mibi04g0903 PK_Tyr_Ser-Thr 4.6e-43 CL0016