Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0866 ATGGATGTGGATGAGGCCGATTTCATCGATGAATCCAGCATTAACCATAATTGCTCATTTGATGATGATGATCATGAAGAGTTCCTTAAGGAGATCCTTCATGATCAACCTTGTCTCTCTTCTGATGAGATTGAAACTTCCACTCTTCAAAACAATAATGTGGTCGCCGCAGCCCCCACAAACGCCAACTTTGACGATTCCGGCAGCCATCAGTTTCATAACGACTCGATCCTCTCAGAACTTGCCACCTGTTTATCTGGCAAACCTGACACCTTACCGTCTCCACCATCCTCTTACATTCTCTCCTTCAACAACTCAACGGTATTACCGGCCGCCTCCATGGATGATGATTATATGAAACATGAATCTGCTGCGAAGAGTAGTAATAATAAGGAGCAATATTCAGAGAGTAGCAATGTACGAGGAGGAGGCTCACTTGTTTCGCTGAAACGAAGCCTTAAAAACCCTAATGGTGACATGATGCCAAAACAAGGAGGCACAAAGAAGGCTCGAAGATCGTCTGAGACCTTGGATCATATAATGGCTGAAAGAAGAAGGAGACAAGAAATCACTGAGAAGTTTATTGCACTCTCAGCTACAATTCCTGGTTTGAAGAAGATAGGACCAAGGCAGGATCAAGATGCCTCCATATTTTTGGGTCAGATTGACAAGTCATCTATACTTAGTGAAGCTATCAATTACGTCAAGAGACTTCAAGAAAGAGTGAGAGAGCTAGAGGAACAGAACAAGAAGATAAGTGAACAATCATCAATGTCATGTAGAAAGAAATCGTACCATCCCAAGGCCGAAGATCATCACCATCATAAAGACAATACATTAAACTCTAATTGTGAAATGATGAGCTCTGATGAAGATGAATATTGCTTCAGAAGTAGTAGTAATAATAATGAAGCAATCTCTCAAGTGGAAGCAAGATTGTTAAAGAAGGAGATTCTCATCAGAATCCAATGCGTGAGACAAAAAGGCATCATGCTTAACATATTCACTCTTCTCACAAATCTTCATTTCTCCATAATCAGTAGTGGTGTTTTACCATTTGGGGCCTCCTCTCTTGACATTACCATTATCGCCGAGGTTGGTGACCAATGCAAAATACCAGTGAAGGAAGTAGTGAACAAGCTAAGAGTGGCCTTGTTGAGCTCATCTGAGAACAAAAAGTGA 1182 0.4129 MDVDEADFIDESSINHNCSFDDDDHEEFLKEILHDQPCLSSDEIETSTLQNNNVVAAAPTNANFDDSGSHQFHNDSILSELATCLSGKPDTLPSPPSSYILSFNNSTVLPAASMDDDYMKHESAAKSSNNKEQYSESSNVRGGGSLVSLKRSLKNPNGDMMPKQGGTKKARRSSETLDHIMAERRRRQEITEKFIALSATIPGLKKIGPRQDQDASIFLGQIDKSSILSEAINYVKRLQERVRELEEQNKKISEQSSMSCRKKSYHPKAEDHHHHKDNTLNSNCEMMSSDEDEYCFRSSSNNNEAISQVEARLLKKEILIRIQCVRQKGIMLNIFTLLTNLHFSIISSGVLPFGASSLDITIIAEVGDQCKIPVKEVVNKLRVALLSSSENKK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0866 393 MobiDBLite consensus disorder prediction 128 145 - -
Mibi04g0866 393 PANTHER BHLH TRANSCRIPTION FACTOR 31 387 - -
Mibi04g0866 393 MobiDBLite consensus disorder prediction 120 174 - -
Mibi04g0866 393 SMART finulus 180 244 IPR011598 GO:0046983
Mibi04g0866 393 MobiDBLite consensus disorder prediction 247 277 - -
Mibi04g0866 393 Coils Coil 228 255 - -
Mibi04g0866 393 Pfam Helix-loop-helix DNA-binding domain 179 239 IPR011598 GO:0046983
Mibi04g0866 393 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 174 238 IPR011598 GO:0046983
Mibi04g0866 393 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 260 IPR036638 GO:0046983
Mibi04g0866 393 Gene3D - 165 256 IPR036638 GO:0046983
Mibi04g0866 393 MobiDBLite consensus disorder prediction 261 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0866 Mibi-ChrMibi04 17689794 17692717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0866 166 385 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.946 1.89e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g0866 HLH 1.4e-08 No_clan