Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0865 ATGGATATGTCATCATGGCAGAACTGGTTCTCTGATTTGGATGCGGATGAGGCCGATTTTGTCAATGAATCCAGCATTAACTATAATTGTTCATTTGATGATGATGATGATGATGATCATGAAGAATTCCTTAGGGATATCCTTCTTCACCAATCTTGTTTCTCTTCTAATGAGATTGAATGTTACACTCTTCAAAACAATAATGCCGCCACCACCGATACAGCCCCTACCTTTCCTTATAACAGCTCAAGCTCAAGCTCAGGCCTCTCAGAACTTGCCACCAGTTTGTCCGACAAACCTGCGACCACCTTTCCGTCTCCACCATCGTCTTACATTCTCTCCTTCAACAACTCAACGGTAATACCGGCCGTCTCCATGGACGATGATAATACAAAACATGAATCTGCAGTAGTGAAGAGTAGCAACACTAATAAAAGTAAGGAGCAATATTCAGAGAATTGCACTGTACGTGGAGGAGGCACACGACGTGCTTCGCTGAAAAGAACCCTAGAAAACCCTAATGGTGACGTACCGCCAAAGCAAGGAGGCACAAAGAAGGCTCGAAGTTCGTCTGAGACAATGGATCACATAATGGCTGAGAGAAAAAGGAGACAAGAACTCGCTGAAAAGTTTATTGCACTAGCTGCCACAATTCCTGGTTTGAAGAAGATTGACAAGTCATCTATACTAAGTGAAGCTATCAATTACGTGAAGAGACTTCAAGAACGAGTGAGGGAGTTGGAGAAACAGAACGAGAAGATAAGTGAAGAATCATCAGCGTCATGTAGCAAGAAATCGTGCCATCTCAAGGGCGATGATAATCTTCCTCATAATCATCATCAAGACAATACATTAACCTCTACTTGTGAAATGATGAGCTCCGATCATAATGATGAATATTGCTTCAGAATTAGTAGTAATAATAATGAAGCAATCTCTCAAGTGGAAGCAAGATTACTAAACAATGAGATTCTCATCAGAATCCAATGCGAGAGAAGAAAAAACATCATGCTTAACGTGTTCATCCTTCTCACAAATCTTCATTTCTCCATAATCAGTAATAGTGTCTTGCCATTTGGGACCTCCTCTCTTGAAATTACCATTATCGCTGAGGTTGGTGATCACTGCAAAATGCCAGTGAAGGAAGTAGTGAACAAGCTGAGAATAGCCCTATTGAAGTTATCCGAGAAGAAAAAGTGA 1200 0.4108 MDMSSWQNWFSDLDADEADFVNESSINYNCSFDDDDDDDHEEFLRDILLHQSCFSSNEIECYTLQNNNAATTDTAPTFPYNSSSSSSGLSELATSLSDKPATTFPSPPSSYILSFNNSTVIPAVSMDDDNTKHESAVVKSSNTNKSKEQYSENCTVRGGGTRRASLKRTLENPNGDVPPKQGGTKKARSSSETMDHIMAERKRRQELAEKFIALAATIPGLKKIDKSSILSEAINYVKRLQERVRELEKQNEKISEESSASCSKKSCHLKGDDNLPHNHHQDNTLTSTCEMMSSDHNDEYCFRISSNNNEAISQVEARLLNNEILIRIQCERRKNIMLNVFILLTNLHFSIISNSVLPFGTSSLEITIIAEVGDHCKMPVKEVVNKLRIALLKLSEKKK 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0865 399 MobiDBLite consensus disorder prediction 136 158 - -
Mibi04g0865 399 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 191 240 IPR011598 GO:0046983
Mibi04g0865 399 Coils Coil 230 257 - -
Mibi04g0865 399 PANTHER BHLH TRANSCRIPTION FACTOR 42 393 - -
Mibi04g0865 399 Pfam Helix-loop-helix DNA-binding domain 196 241 IPR011598 GO:0046983
Mibi04g0865 399 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 258 IPR036638 GO:0046983
Mibi04g0865 399 SMART finulus 197 246 IPR011598 GO:0046983
Mibi04g0865 399 Gene3D - 189 265 IPR036638 GO:0046983
Mibi04g0865 399 MobiDBLite consensus disorder prediction 127 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0865 Mibi-ChrMibi04 17636377 17638605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0865 183 391 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.028 2.32e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g0865 HLH 3.9e-09 No_clan