Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0862 ATGGAGGTCCCATGGCAAAACTGGTTCTCAGATCTGGAAATGGATGAGGCAGAATTCTTCAATCAGTCACACAAAACTTGCTCTTTCGATGATGATGATGAGTTTCTTAAAGAGATATTTCACCAACCTTCTTTCTCTTCTGAGAGCGATAGTACTCATCATTCTTCCTCTATTCATAACAAAGCCATCACCGCCACCATATCCGATGGTGGTGGCTCCGCAGCCGCCACAACGCCCACCGGAGTTAGCAGCTTATCTGTGGATAACGACTCCGGCGCCACCGTTGCCCGGCTGAAACCTACCGGCTCCAGCTCAATCCTCTCAAAACTTGGTAGCTTCTCAGACAACAAACCTATGGCCTCATCATCTCCTTCAACTTATATTCTCTCTTTCGATAACTCAACGGTGCTACCGGCTACCTCAGACAACAGTTACCGGAAACATGAATCCGCCGTGAAGAGTGGTAGTCAAGAGAAATTGGAGAGTAGTACAACAGAAGGAGAAGGAGTTGGTGGTGGTACAACACGTGCTTCTCAAAAAAGAACCCTAGAAAGCCATAATAGTGATGATCATCATCAGCCAAAACTTAATAAAGGGACAAAGAAAACTAGAAATTCATCTGAGACATTGGATCACATAATGGCTGAGAGAAAAAGGAGACAGGAACTCACTGAGAAGTTTATCGCACTTTCAGCTACAATTCCTGGTTTGAAGAAGATTGACAAGGCTTCTATACTAAGCGAAGCTATAATTCACGTGAAGCAACTTCAAGAGCGAGTGAAAGAGTTAGAGGAACAGAACAAGAAGATGATGAATAGTAGTGTGGAGTCATTAATGTCTTACATGATGAAGAACAAGAAGAAGTCATCGTCGTCGTCGAGCAATAAGCTCTATAATAATAATGGTGAAGATATTGATTATCAAAACACTACCTCTAATGAAGATTATTACTTCAGAATAAATGAAGCACTTCCTGAAGTTGAAGCAAGAGTTTTACAAAGCGAAGTTCTCATCAGAATCCACTGTGAGAAACAAAAAGGCGTTATTCTTAACTTATTGGCTCAGCTCCAAACTCTTCATTTCTCCATAATCACTCATAGTGTGTTGCCATTTGGAAATTCCACTCTTGATATTACCATCATCACTGAGGTTGATGAGGAACACAACATACCAGTGAAGGAACTTGTGGAAAAGTTGAGAATGACTCTTTTGAAGAAGTCATAA 1224 0.4142 MEVPWQNWFSDLEMDEAEFFNQSHKTCSFDDDDEFLKEIFHQPSFSSESDSTHHSSSIHNKAITATISDGGGSAAATTPTGVSSLSVDNDSGATVARLKPTGSSSILSKLGSFSDNKPMASSSPSTYILSFDNSTVLPATSDNSYRKHESAVKSGSQEKLESSTTEGEGVGGGTTRASQKRTLESHNSDDHHQPKLNKGTKKTRNSSETLDHIMAERKRRQELTEKFIALSATIPGLKKIDKASILSEAIIHVKQLQERVKELEEQNKKMMNSSVESLMSYMMKNKKKSSSSSSNKLYNNNGEDIDYQNTTSNEDYYFRINEALPEVEARVLQSEVLIRIHCEKQKGVILNLLAQLQTLHFSIITHSVLPFGNSTLDITIITEVDEEHNIPVKELVEKLRMTLLKKS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0862 407 MobiDBLite consensus disorder prediction 138 208 - -
Mibi04g0862 407 Pfam Helix-loop-helix DNA-binding domain 212 257 IPR011598 GO:0046983
Mibi04g0862 407 MobiDBLite consensus disorder prediction 283 305 - -
Mibi04g0862 407 Gene3D - 206 280 IPR036638 GO:0046983
Mibi04g0862 407 MobiDBLite consensus disorder prediction 68 88 - -
Mibi04g0862 407 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 278 IPR036638 GO:0046983
Mibi04g0862 407 Coils Coil 246 273 - -
Mibi04g0862 407 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 256 IPR011598 GO:0046983
Mibi04g0862 407 MobiDBLite consensus disorder prediction 156 181 - -
Mibi04g0862 407 MobiDBLite consensus disorder prediction 182 208 - -
Mibi04g0862 407 PANTHER BHLH TRANSCRIPTION FACTOR 33 406 - -
Mibi04g0862 407 SMART finulus 213 262 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0862 Mibi-ChrMibi04 17576233 17579662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0862 198 403 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.333 2.45e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g0862 HLH 3.4e-08 No_clan