Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0861 ATGGATGGTGCTGAAGACTTCCATGGCCAATTTTGTCATATGATGATGTCTTTTGATGAGGAAGATGAAGAGTTTCTAAGAAACATTCTTCAGCAGCAGCCTCAAGCTGGTGGAAGTTGTAGTAACAATAATAACAAGAGGAAGAATAATCACTTGTCTTCTTCTCAAAGTGAGGATAAATTATCCTTTCCCACCGTCGATTTCTCTACCGACAACTCCGGCAACCGGGTCGGTGGAGGTTCAAAAGACGATGGAAAAACCCGTGTCATGTCTTCTAAATCATACATTTTATCATTTGATCAATCCAATGTAATACCAGCATCATCAGAAGTAATCCCAAAACATGAAGAATCTAGTACTACCCCTGAACTTTGTTCATTAAAAAGGACGAGATCAGAGACATGTAATAATGTAGAGCCAAGGAAGAAGACTAGAAGCTGTTTGGAGAGTGCAAATCACATCATGGCTGAAAGGAAGAGGAGGCAGCAACTCACTGAGAGATTTATTGCACTCTCTGCAACTATTCCGGGCTTGAAGAAGATGGACAAAGCCACAATTCTTCAAGAAGCAACGAAATATGTGAAGCAGCTTCAAGAACGAGTAACGGAGCTAGAGAAACAAAATAGCAACGTAAACAACACATCATTATCAGAGTCATTATCAATGAGATCGATGAAGAAATATTGTGAGCTACACAGAATTAATGATGATGATAATATTATGTGTGAAGCCAAAAATGAAGTGTTGCCACAGATTGATGCAAAAGTGTTGGAGAATCAAGTGTTGTTTGGGATATATTGTGAGAAGCAAAAGGGCATTGAGTTTAAAATATTGACTTTGCTTGAGAGCTTTCATCTGTATGTTACTAGCAGCAGCGTTTTGCCATTTGGGAATTCCACTCTTGGCATCACCATCATTGCCCAGATGGGCGAGGAATACAGCATGACAGTGAATGAAGTGATGAAAAACCTTCAACAAGTTCTGTCAAAGTCGCAAGAAGAAGTTGATCCGTACTAG 1017 0.3963 MDGAEDFHGQFCHMMMSFDEEDEEFLRNILQQQPQAGGSCSNNNNKRKNNHLSSSQSEDKLSFPTVDFSTDNSGNRVGGGSKDDGKTRVMSSKSYILSFDQSNVIPASSEVIPKHEESSTTPELCSLKRTRSETCNNVEPRKKTRSCLESANHIMAERKRRQQLTERFIALSATIPGLKKMDKATILQEATKYVKQLQERVTELEKQNSNVNNTSLSESLSMRSMKKYCELHRINDDDNIMCEAKNEVLPQIDAKVLENQVLFGIYCEKQKGIEFKILTLLESFHLYVTSSSVLPFGNSTLGITIIAQMGEEYSMTVNEVMKNLQQVLSKSQEEVDPY 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0861 338 Pfam Helix-loop-helix DNA-binding domain 151 198 IPR011598 GO:0046983
Mibi04g0861 338 PANTHER BHLH TRANSCRIPTION FACTOR 15 330 - -
Mibi04g0861 338 Gene3D - 138 214 IPR036638 GO:0046983
Mibi04g0861 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 213 IPR036638 GO:0046983
Mibi04g0861 338 SMART finulus 154 203 IPR011598 GO:0046983
Mibi04g0861 338 Coils Coil 187 214 - -
Mibi04g0861 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Mibi04g0861 338 MobiDBLite consensus disorder prediction 31 87 - -
Mibi04g0861 338 MobiDBLite consensus disorder prediction 31 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0861 Mibi-ChrMibi04 17536569 17539465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0861 153 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 42.932 2.62e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g0861 HLH 4.9e-11 No_clan